Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Mir3072-201ENSMUST00000175610 83 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm18588-201ENSMUST00000177308 492 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm21894-201ENSMUST00000179631 546 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Mir6398-201ENSMUST00000184541 102 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Txn-ps1-201ENSMUST00000186385 309 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm28639-201ENSMUST00000191519 481 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm37884-201ENSMUST00000191857 818 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Ighv1-38-201ENSMUST00000192755 349 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm35212-201ENSMUST00000196672 606 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm7733-201ENSMUST00000199038 919 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm31532-201ENSMUST00000203555 767 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm9373-201ENSMUST00000208724 599 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm30196-201ENSMUST00000208957 160 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm19709-201ENSMUST00000215403 482 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm46231-201ENSMUST00000220152 314 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 AC139569.1-201ENSMUST00000226080 614 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm24046-201ENSMUST00000083111 165 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm37407-201ENSMUST00000194793 1316 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm23701-201ENSMUST00000103893 110 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm25507-201ENSMUST00000116981 144 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm14786-201ENSMUST00000117127 944 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm7803-201ENSMUST00000117176 1015 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm14879-201ENSMUST00000117308 507 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm13607-201ENSMUST00000117875 539 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm12740-201ENSMUST00000118794 308 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm5759-201ENSMUST00000119203 811 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm4914-201ENSMUST00000119757 459 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm12297-201ENSMUST00000121380 979 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm13459-201ENSMUST00000121558 646 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm24198-201ENSMUST00000157812 108 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm16026-205ENSMUST00000162923 641 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm5946-201ENSMUST00000182340 970 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm38305-201ENSMUST00000194825 223 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm42438-201ENSMUST00000197832 974 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm38395-201ENSMUST00000199904 830 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 AC139941.1-201ENSMUST00000221517 478 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 CT485612.3-201ENSMUST00000222179 408 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Gm18960-201ENSMUST00000222962 713 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Pcdh1F7BJK1 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms