Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm27387-201ENSMUST00000184583 116 ntBASIC6□□□□□ -1.45
Col6a3E9PWQ3 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Gm19169-201ENSMUST00000220109 1246 ntBASIC6□□□□□ -1.45
Col6a3E9PWQ3 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Mtor-202ENSMUST00000103221 8564 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Adgrl3-208ENSMUST00000118442 5101 ntTSL 5 BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Gm10693-201ENSMUST00000144146 2037 ntBASIC6□□□□□ -1.45
Col6a3E9PWQ3 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Gm44652-201ENSMUST00000208648 2854 ntBASIC6□□□□□ -1.45
Col6a3E9PWQ3 Gm38036-201ENSMUST00000194586 3564 ntBASIC6□□□□□ -1.45
Col6a3E9PWQ3 Gm15670-201ENSMUST00000117740 447 ntBASIC6□□□□□ -1.45
Col6a3E9PWQ3 Gm15812-201ENSMUST00000162331 748 ntBASIC6□□□□□ -1.45
Col6a3E9PWQ3 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Gm33952-201ENSMUST00000197795 408 ntBASIC6□□□□□ -1.45
Col6a3E9PWQ3 Glud-ps-201ENSMUST00000206310 657 ntBASIC6□□□□□ -1.45
Col6a3E9PWQ3 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Thap6-201ENSMUST00000191860 3151 ntBASIC6□□□□□ -1.45
Col6a3E9PWQ3 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 AC154176.2-201ENSMUST00000225376 6429 ntBASIC6□□□□□ -1.45
Col6a3E9PWQ3 Syt11-201ENSMUST00000090945 4567 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Gm16345-201ENSMUST00000146065 158 ntBASIC6□□□□□ -1.45
Col6a3E9PWQ3 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC6□□□□□ -1.45
Col6a3E9PWQ3 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Mir3620-201ENSMUST00000184710 61 ntBASIC6□□□□□ -1.45
Col6a3E9PWQ3 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col6a3E9PWQ3 CU024910.1-201ENSMUST00000214310 418 ntBASIC6□□□□□ -1.45
Col6a3E9PWQ3 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col6a3E9PWQ3 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Gm13733-201ENSMUST00000117290 535 ntBASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Gm15168-201ENSMUST00000121057 316 ntBASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Gm28377-201ENSMUST00000189695 720 ntBASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Rreb1-210ENSMUST00000149745 4320 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Patj-207ENSMUST00000107034 4799 ntTSL 5 BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Phf8-201ENSMUST00000046950 5728 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Gm22993-201ENSMUST00000175423 254 ntBASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Gm18702-201ENSMUST00000196923 588 ntBASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Gm45405-201ENSMUST00000211544 609 ntBASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Gm7045-201ENSMUST00000221466 605 ntBASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Tdrd1-203ENSMUST00000111606 4914 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a3E9PWQ3 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Gm37107-201ENSMUST00000195326 2552 ntBASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Col6a3E9PWQ3 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 173.4 ms