Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm14728-201ENSMUST00000122196 492 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm25318-201ENSMUST00000122554 314 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm11545-201ENSMUST00000146507 375 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm22728-201ENSMUST00000158087 129 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm24735-201ENSMUST00000158859 118 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm3025-201ENSMUST00000163454 489 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm3077-201ENSMUST00000165903 627 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm2878-201ENSMUST00000170173 486 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm26381-201ENSMUST00000174895 92 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm2429-201ENSMUST00000194635 586 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 AC099934.1-201ENSMUST00000200493 79 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm44061-201ENSMUST00000203962 1195 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm44422-201ENSMUST00000204142 1025 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm32899-201ENSMUST00000219694 207 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm10780-201ENSMUST00000099459 285 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
H2afb3S4R1G7 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
H2afb3S4R1G7 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms