Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm22811-201ENSMUST00000157468 154 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm26351-201ENSMUST00000157532 232 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm23533-201ENSMUST00000157540 245 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm23663-201ENSMUST00000158045 80 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm5698-201ENSMUST00000178317 724 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm29234-201ENSMUST00000187452 1262 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm29281-201ENSMUST00000188077 381 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm5252-201ENSMUST00000189030 909 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm43560-201ENSMUST00000198100 773 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm36247-201ENSMUST00000211834 285 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 AC153971.2-201ENSMUST00000214553 777 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 AC154307.1-201ENSMUST00000214799 90 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 AC163667.1-201ENSMUST00000225201 1289 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm25259-201ENSMUST00000083048 193 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm4073-201ENSMUST00000176792 3500 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Gm30698-201ENSMUST00000214789 3198 ntBASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.04□□□□□ -1.28
Trim39Q9ESN2 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Gm5841-201ENSMUST00000195307 2177 ntBASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 AC168056.4-201ENSMUST00000223835 2567 ntBASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Gm45112-201ENSMUST00000208576 5125 ntBASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Gm16082-201ENSMUST00000115992 377 ntBASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Gm22072-201ENSMUST00000116850 121 ntBASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Gm13473-201ENSMUST00000119289 367 ntBASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Gm11653-201ENSMUST00000119992 1009 ntBASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Mir1932-201ENSMUST00000157390 90 ntBASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Gm24465-201ENSMUST00000178398 107 ntBASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Gm27332-201ENSMUST00000184893 112 ntBASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC7.03□□□□□ -1.28
Trim39Q9ESN2 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Gm6799-201ENSMUST00000186919 573 ntBASIC7.03□□□□□ -1.28
Trim39Q9ESN2 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms