Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm37262-201ENSMUST00000192816 1818 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Gm26422-201ENSMUST00000104276 132 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Gm12307-201ENSMUST00000120581 590 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Gm26557-201ENSMUST00000180756 493 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Gm29385-201ENSMUST00000186831 363 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Gm7492-201ENSMUST00000201745 725 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Gm44253-201ENSMUST00000203387 628 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Gm44265-201ENSMUST00000203631 465 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Gm45448-201ENSMUST00000211739 209 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 AC091783.3-201ENSMUST00000223969 681 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 CT009556.1-201ENSMUST00000227282 449 ntBASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Cdc40Q9DC48 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC5.9□□□□□ -1.47
Cdc40Q9DC48 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Cdc40Q9DC48 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdc40Q9DC48 Gm37685-201ENSMUST00000193507 2177 ntBASIC5.9□□□□□ -1.47
Cdc40Q9DC48 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Cdc40Q9DC48 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdc40Q9DC48 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cdc40Q9DC48 Gm45786-201ENSMUST00000213021 2278 ntBASIC5.9□□□□□ -1.47
Cdc40Q9DC48 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC5.9□□□□□ -1.47
Cdc40Q9DC48 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC5.9□□□□□ -1.47
Cdc40Q9DC48 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Cdc40Q9DC48 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm43343-201ENSMUST00000202454 1926 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm12874-201ENSMUST00000117190 913 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm13207-201ENSMUST00000119862 773 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm15618-201ENSMUST00000121610 452 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm12438-201ENSMUST00000122034 336 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm24383-201ENSMUST00000122691 333 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm22094-201ENSMUST00000158976 117 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm6611-201ENSMUST00000163830 1272 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm26738-201ENSMUST00000181312 601 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm29509-201ENSMUST00000185716 321 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm8506-201ENSMUST00000186661 829 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm37809-201ENSMUST00000195050 931 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm5694-201ENSMUST00000195648 641 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm42799-201ENSMUST00000201331 328 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 AC131654.1-201ENSMUST00000219675 745 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 CT030254.1-201ENSMUST00000225450 1078 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 AC137871.3-201ENSMUST00000226628 225 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm26442-201ENSMUST00000082588 153 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm24695-201ENSMUST00000083877 83 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Cdc40Q9DC48 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms