Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm13735-201ENSMUST00000120217 670 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm6142-201ENSMUST00000120290 325 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm13877-201ENSMUST00000120614 417 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm3585-201ENSMUST00000173438 875 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm21909-201ENSMUST00000178260 439 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Mir7033-201ENSMUST00000184259 81 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm29496-201ENSMUST00000189854 693 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm37463-201ENSMUST00000193819 796 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm7804-202ENSMUST00000194187 854 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 AC153152.2-201ENSMUST00000223165 959 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 AC154527.3-201ENSMUST00000225519 989 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 CT025525.1-201ENSMUST00000226325 1054 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm43335-201ENSMUST00000198299 3276 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm43788-201ENSMUST00000201539 2417 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm45201-201ENSMUST00000207187 2679 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm22256-201ENSMUST00000102291 107 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Cdc42se1-202ENSMUST00000107199 652 ntTSL 5 BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm13983-201ENSMUST00000118018 865 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm15616-201ENSMUST00000118662 375 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm12535-201ENSMUST00000121025 484 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm3160-201ENSMUST00000128343 607 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm25395-201ENSMUST00000157343 272 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm25556-201ENSMUST00000158077 144 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Mir6337-201ENSMUST00000184194 105 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm29383-201ENSMUST00000188284 480 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm37604-201ENSMUST00000191749 1272 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm18717-201ENSMUST00000192744 1241 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm37934-201ENSMUST00000192902 402 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm38334-201ENSMUST00000195060 313 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm36932-201ENSMUST00000195226 929 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm43308-201ENSMUST00000197236 373 ntBASIC7.01□□□□□ -1.29
Ddx56Q9D0R4 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms