Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Cdk5rap3Q99LM2 Gm43180-201ENSMUST00000197541 2886 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 AC159624.1-201ENSMUST00000217762 1344 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm44895-201ENSMUST00000206670 1538 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm22103-201ENSMUST00000116733 121 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm26475-201ENSMUST00000116769 121 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm23620-201ENSMUST00000116812 121 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm25042-201ENSMUST00000116856 121 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm25540-201ENSMUST00000116880 121 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm13455-201ENSMUST00000118767 517 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm6987-201ENSMUST00000119319 428 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm11370-201ENSMUST00000120583 260 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm15750-201ENSMUST00000120970 616 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm7599-201ENSMUST00000121453 796 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm8648-201ENSMUST00000122457 221 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm22214-201ENSMUST00000157563 172 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm24422-201ENSMUST00000157800 119 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm7289-201ENSMUST00000168993 734 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm25675-201ENSMUST00000174979 118 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm23968-201ENSMUST00000175047 125 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm23550-201ENSMUST00000179003 121 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm25123-201ENSMUST00000179154 121 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm25353-201ENSMUST00000179366 121 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm22992-201ENSMUST00000179496 121 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm25892-201ENSMUST00000179867 121 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm24092-201ENSMUST00000180257 121 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm27006-201ENSMUST00000182218 943 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm37491-201ENSMUST00000192552 1111 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm2229-201ENSMUST00000193328 710 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Ighv1-17-201ENSMUST00000194435 350 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm43655-201ENSMUST00000197367 222 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 AC131033.2-201ENSMUST00000228138 1011 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Gm44229-201ENSMUST00000203211 2487 ntBASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Cdk5rap3Q99LM2 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Gm15016-201ENSMUST00000117300 720 ntBASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Gm15901-201ENSMUST00000117663 941 ntBASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Gm13735-201ENSMUST00000120217 670 ntBASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Gm23884-201ENSMUST00000122687 294 ntBASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Cdk5rap3Q99LM2 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 111.7 ms