Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Gm24869-201ENSMUST00000104072 128 ntBASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Gm24989-201ENSMUST00000104461 88 ntBASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Apc-ps1-201ENSMUST00000119356 470 ntBASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Gm12540-201ENSMUST00000121938 319 ntBASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Gm8648-201ENSMUST00000122457 221 ntBASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Gm3140-201ENSMUST00000163523 481 ntBASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Gm9285-201ENSMUST00000177691 697 ntBASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Gm29784-201ENSMUST00000196217 406 ntBASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Gm44227-201ENSMUST00000203576 241 ntBASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 AC167222.2-201ENSMUST00000220014 295 ntBASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Gm42892-201ENSMUST00000196227 3973 ntBASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 AC153729.4-201ENSMUST00000217582 3826 ntBASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ccdc38Q8CDN8 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm42881-201ENSMUST00000198636 3344 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm25093-201ENSMUST00000103993 132 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm22103-201ENSMUST00000116733 121 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm26475-201ENSMUST00000116769 121 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm23620-201ENSMUST00000116812 121 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm25042-201ENSMUST00000116856 121 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm25540-201ENSMUST00000116880 121 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm11689-201ENSMUST00000120766 302 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm11925-201ENSMUST00000121375 535 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm14847-201ENSMUST00000121978 519 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm23550-201ENSMUST00000179003 121 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm25123-201ENSMUST00000179154 121 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm25353-201ENSMUST00000179366 121 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm22992-201ENSMUST00000179496 121 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm25892-201ENSMUST00000179867 121 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm24092-201ENSMUST00000180257 121 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Mir6987-201ENSMUST00000184789 73 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm37770-201ENSMUST00000192855 772 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 AC166323.1-201ENSMUST00000217756 367 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm46364-201ENSMUST00000218548 319 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm31711-201ENSMUST00000220687 196 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm9321-201ENSMUST00000221179 778 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 AV026068-220ENSMUST00000224153 1147 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 AC157572.1-201ENSMUST00000227187 825 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 AC115735.5-201ENSMUST00000228386 397 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm15732-201ENSMUST00000079794 480 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 AC155298.1-201ENSMUST00000225350 3250 ntBASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ccdc38Q8CDN8 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc38Q8CDN8 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc38Q8CDN8 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ccdc38Q8CDN8 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.04□□□□□ -1.28
Ccdc38Q8CDN8 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms