Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC8.21□□□□□ -1.09
Trim47Q8C0E3 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
Trim47Q8C0E3 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
Trim47Q8C0E3 Gm13106-201ENSMUST00000119045 1443 ntBASIC8.21□□□□□ -1.09
Trim47Q8C0E3 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim47Q8C0E3 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
Trim47Q8C0E3 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
Trim47Q8C0E3 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm18726-201ENSMUST00000218175 2010 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Serpina3h-202ENSMUST00000116393 1226 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm14279-201ENSMUST00000117142 332 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm10243-201ENSMUST00000117571 333 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm13640-201ENSMUST00000118445 264 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm11746-201ENSMUST00000119843 821 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm11910-201ENSMUST00000121624 432 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm22795-201ENSMUST00000157233 118 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm16139-201ENSMUST00000160015 420 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm17137-202ENSMUST00000165729 957 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm6472-202ENSMUST00000187973 582 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm17965-201ENSMUST00000193904 517 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm29745-201ENSMUST00000198005 687 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm44449-201ENSMUST00000203610 153 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm44050-201ENSMUST00000204263 527 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm7039-201ENSMUST00000205138 346 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 AC101984.1-201ENSMUST00000219639 402 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 AC116502.1-201ENSMUST00000220989 291 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 AC165146.1-201ENSMUST00000223777 900 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 AC133598.2-201ENSMUST00000224302 624 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 AV026068-229ENSMUST00000225516 595 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Sprr3-201ENSMUST00000058142 1222 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm25739-201ENSMUST00000082886 107 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm23242-201ENSMUST00000083055 107 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Gm45537-201ENSMUST00000211539 2708 ntBASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Trim47Q8C0E3 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 AC159193.3-201ENSMUST00000221902 2622 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm12734-201ENSMUST00000120228 948 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm12045-201ENSMUST00000122122 573 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm11254-201ENSMUST00000122368 653 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm24517-201ENSMUST00000122560 107 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm4764-201ENSMUST00000130207 1233 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Mup-ps4-201ENSMUST00000151005 539 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm17060-201ENSMUST00000172394 824 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm3611-201ENSMUST00000173687 877 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm27539-201ENSMUST00000184971 224 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm28428-201ENSMUST00000188886 697 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm7341-201ENSMUST00000192183 926 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm35108-201ENSMUST00000194321 699 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Gm33191-201ENSMUST00000195604 699 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 Igkv12-47-201ENSMUST00000196961 356 ntBASIC8.2□□□□□ -1.1
Trim47Q8C0E3 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC8.2□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 123.1 ms