Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm9519-201ENSMUST00000206108 1337 ntBASIC8.77□□□□□ -1.01
Usp47Q8BY87 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC8.77□□□□□ -1.01
Usp47Q8BY87 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm43981-201ENSMUST00000203285 1467 ntBASIC8.77□□□□□ -1.01
Usp47Q8BY87 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm7108-201ENSMUST00000118038 3407 ntBASIC8.77□□□□□ -1.01
Usp47Q8BY87 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm44102-201ENSMUST00000204031 1666 ntBASIC8.77□□□□□ -1.01
Usp47Q8BY87 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
Usp47Q8BY87 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Usp47Q8BY87 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gm18632-201ENSMUST00000222597 2087 ntBASIC8.76□□□□□ -1.01
Usp47Q8BY87 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gm13641-201ENSMUST00000117993 473 ntBASIC8.76□□□□□ -1.01
Usp47Q8BY87 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gm11925-201ENSMUST00000121375 535 ntBASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gm23757-201ENSMUST00000158353 100 ntBASIC8.76□□□□□ -1.01
Usp47Q8BY87 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gm29551-201ENSMUST00000190913 698 ntBASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gm35013-201ENSMUST00000197218 832 ntBASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gm44239-201ENSMUST00000204228 271 ntBASIC8.76□□□□□ -1.01
Usp47Q8BY87 AC153357.1-201ENSMUST00000219190 482 ntBASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gm9237-201ENSMUST00000221499 548 ntBASIC8.76□□□□□ -1.01
Usp47Q8BY87 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gm22126-201ENSMUST00000083244 142 ntBASIC8.76□□□□□ -1.01
Usp47Q8BY87 Olfr467-201ENSMUST00000084756 927 ntBASIC8.76□□□□□ -1.01
Usp47Q8BY87 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gm37894-201ENSMUST00000195416 2599 ntBASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gm11516-201ENSMUST00000118450 1582 ntBASIC8.76□□□□□ -1.01
Usp47Q8BY87 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gm3883-201ENSMUST00000098119 3229 ntBASIC8.76□□□□□ -1.01
Usp47Q8BY87 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Usp47Q8BY87 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
Usp47Q8BY87 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Gm8317-201ENSMUST00000121261 471 ntBASIC8.75□□□□□ -1.01
Usp47Q8BY87 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Gm7952-201ENSMUST00000180540 984 ntBASIC8.75□□□□□ -1.01
Usp47Q8BY87 Gm38291-201ENSMUST00000193671 259 ntBASIC8.75□□□□□ -1.01
Usp47Q8BY87 Gm44382-201ENSMUST00000198683 122 ntBASIC8.75□□□□□ -1.01
Usp47Q8BY87 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC8.75□□□□□ -1.01
Usp47Q8BY87 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Gm18796-201ENSMUST00000190440 1767 ntBASIC8.75□□□□□ -1.01
Usp47Q8BY87 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC8.75□□□□□ -1.01
Usp47Q8BY87 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
Usp47Q8BY87 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC8.75□□□□□ -1.01
Usp47Q8BY87 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC8.75□□□□□ -1.01
Usp47Q8BY87 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Usp47Q8BY87 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Usp47Q8BY87 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
Usp47Q8BY87 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC8.75□□□□□ -1.01
Usp47Q8BY87 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Gm25917-201ENSMUST00000104267 130 ntBASIC8.74□□□□□ -1.01
Usp47Q8BY87 Gm13338-201ENSMUST00000120235 361 ntBASIC8.74□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms