Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 CT025535.2-201ENSMUST00000228572 7441 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm37940-201ENSMUST00000194243 3251 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Mir466j-201ENSMUST00000116876 122 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm15616-201ENSMUST00000118662 375 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm15186-201ENSMUST00000119345 563 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm15158-201ENSMUST00000120577 570 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm14300-201ENSMUST00000120800 946 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm8317-201ENSMUST00000121261 471 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm24111-201ENSMUST00000175491 97 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm37609-201ENSMUST00000191778 678 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm37215-201ENSMUST00000194927 1259 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm7626-201ENSMUST00000195801 353 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Mir6906-201ENSMUST00000198998 58 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm43098-201ENSMUST00000199989 1297 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm19653-201ENSMUST00000204326 1039 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 A1cf-203ENSMUST00000224400 1204 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Gm26163-201ENSMUST00000083792 178 ntBASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Ddx55Q6ZPL9 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Ddx55Q6ZPL9 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Ddx55Q6ZPL9 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.4□□□□□ -1.23
Ddx55Q6ZPL9 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Ddx55Q6ZPL9 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Ddx55Q6ZPL9 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.4□□□□□ -1.23
Ddx55Q6ZPL9 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.23
Ddx55Q6ZPL9 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.4□□□□□ -1.23
Ddx55Q6ZPL9 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.4□□□□□ -1.23
Ddx55Q6ZPL9 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.4□□□□□ -1.23
Ddx55Q6ZPL9 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.23
Ddx55Q6ZPL9 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm8424-201ENSMUST00000117716 988 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm8692-201ENSMUST00000118102 438 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm15048-201ENSMUST00000118201 954 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm13690-201ENSMUST00000118989 285 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm8061-201ENSMUST00000122380 350 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm6061-201ENSMUST00000175860 492 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm27024-201ENSMUST00000182561 755 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Mir6367-201ENSMUST00000183385 102 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm37376-201ENSMUST00000192176 453 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm37784-201ENSMUST00000193233 189 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm6119-201ENSMUST00000193443 1206 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm37375-201ENSMUST00000193859 387 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm37385-201ENSMUST00000195223 387 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm43798-201ENSMUST00000202056 394 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm18290-201ENSMUST00000202900 844 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm44869-201ENSMUST00000208836 357 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm10688-201ENSMUST00000214985 520 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 AC161586.1-201ENSMUST00000223232 547 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 AC174797.2-203ENSMUST00000224017 716 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms