Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
H3f3aP84244 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
H3f3aP84244 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
H3f3aP84244 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
H3f3aP84244 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
H3f3aP84244 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
H3f3aP84244 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3aP84244 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3aP84244 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
H3f3aP84244 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3aP84244 AC151904.1-201ENSMUST00000219945 1498 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3aP84244 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
H3f3aP84244 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.6□□□□□ -1.51
H3f3aP84244 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
H3f3aP84244 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
H3f3aP84244 Gm12713-201ENSMUST00000118404 764 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 Gm13740-201ENSMUST00000120590 310 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 Gm12451-201ENSMUST00000121636 633 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 Gm13669-201ENSMUST00000122366 457 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3aP84244 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC5.6□□□□□ -1.51
H3f3aP84244 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC5.6□□□□□ -1.51
H3f3aP84244 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.6□□□□□ -1.51
H3f3aP84244 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC5.6□□□□□ -1.51
H3f3aP84244 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC5.6□□□□□ -1.51
H3f3aP84244 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5.6□□□□□ -1.51
H3f3aP84244 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 Gm37477-201ENSMUST00000195215 884 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 Gm43390-201ENSMUST00000196614 421 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3aP84244 Gm8637-201ENSMUST00000212919 1085 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC5.6□□□□□ -1.51
H3f3aP84244 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 Gm19116-201ENSMUST00000218592 642 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 AC173482.3-201ENSMUST00000225492 1212 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 AC174678.3-201ENSMUST00000227568 362 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
H3f3aP84244 Gm24032-201ENSMUST00000083932 159 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.6□□□□□ -1.51
H3f3aP84244 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3aP84244 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
H3f3aP84244 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3aP84244 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3aP84244 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3aP84244 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.6□□□□□ -1.51
H3f3aP84244 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3aP84244 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC5.6□□□□□ -1.51
H3f3aP84244 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
H3f3aP84244 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3aP84244 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
H3f3aP84244 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.59□□□□□ -1.51
H3f3aP84244 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.59□□□□□ -1.51
H3f3aP84244 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.59□□□□□ -1.51
H3f3aP84244 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
H3f3aP84244 Gm42685-201ENSMUST00000200378 2390 ntBASIC5.59□□□□□ -1.51
H3f3aP84244 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3aP84244 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
H3f3aP84244 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
H3f3aP84244 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
H3f3aP84244 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
H3f3aP84244 Gm38284-201ENSMUST00000194803 4539 ntBASIC5.59□□□□□ -1.51
H3f3aP84244 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3aP84244 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3aP84244 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.59□□□□□ -1.51
H3f3aP84244 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
H3f3aP84244 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3aP84244 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3aP84244 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3aP84244 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.59□□□□□ -1.51
H3f3aP84244 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3aP84244 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3aP84244 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.59□□□□□ -1.51
H3f3aP84244 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3aP84244 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
H3f3aP84244 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3aP84244 Gm4914-201ENSMUST00000119757 459 ntBASIC5.59□□□□□ -1.51
H3f3aP84244 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.59□□□□□ -1.51
H3f3aP84244 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.59□□□□□ -1.51
H3f3aP84244 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.59□□□□□ -1.51
H3f3aP84244 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC5.59□□□□□ -1.51
H3f3aP84244 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
H3f3aP84244 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
H3f3aP84244 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
H3f3aP84244 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3aP84244 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
H3f3aP84244 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
H3f3aP84244 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
H3f3aP84244 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
H3f3aP84244 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.59□□□□□ -1.51
H3f3aP84244 Gm5260-201ENSMUST00000186157 949 ntBASIC5.59□□□□□ -1.51
H3f3aP84244 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.59□□□□□ -1.51
H3f3aP84244 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.59□□□□□ -1.51
H3f3aP84244 Gm38291-201ENSMUST00000193671 259 ntBASIC5.59□□□□□ -1.51
H3f3aP84244 AC099760.1-201ENSMUST00000196300 153 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 122.7 ms