Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Hmgb1P63158 Gm7412-201ENSMUST00000191692 605 ntBASIC7.44□□□□□ -1.22
Hmgb1P63158 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC7.44□□□□□ -1.22
Hmgb1P63158 Gm36985-201ENSMUST00000195595 379 ntBASIC7.44□□□□□ -1.22
Hmgb1P63158 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC7.44□□□□□ -1.22
Hmgb1P63158 Gm43316-201ENSMUST00000197252 1295 ntBASIC7.44□□□□□ -1.22
Hmgb1P63158 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Hmgb1P63158 Gm2860-201ENSMUST00000199226 707 ntBASIC7.44□□□□□ -1.22
Hmgb1P63158 Gm7499-201ENSMUST00000210423 813 ntBASIC7.44□□□□□ -1.22
Hmgb1P63158 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Hmgb1P63158 Gm24405-201ENSMUST00000083033 167 ntBASIC7.44□□□□□ -1.22
Hmgb1P63158 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Hmgb1P63158 Gm10259-201ENSMUST00000091289 1590 ntBASIC7.44□□□□□ -1.22
Hmgb1P63158 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Hmgb1P63158 Mat2a-201ENSMUST00000059472 2804 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Hmgb1P63158 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC7.44□□□□□ -1.22
Hmgb1P63158 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Hmgb1P63158 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Hmgb1P63158 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Hmgb1P63158 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Hmgb1P63158 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Hmgb1P63158 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Hmgb1P63158 AC122305.1-201ENSMUST00000214803 3921 ntBASIC7.44□□□□□ -1.22
Hmgb1P63158 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Hmgb1P63158 Gm37289-201ENSMUST00000195409 1402 ntBASIC7.44□□□□□ -1.22
Hmgb1P63158 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC7.43□□□□□ -1.22
Hmgb1P63158 AC131687.1-201ENSMUST00000225931 5446 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Robo2-210ENSMUST00000226478 8059 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm25379-201ENSMUST00000104338 114 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm12242-201ENSMUST00000118824 738 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm13463-201ENSMUST00000119020 233 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm11338-201ENSMUST00000120086 1160 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm8577-201ENSMUST00000122420 986 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm27001-201ENSMUST00000182252 936 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm21392-201ENSMUST00000182950 972 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm28006-201ENSMUST00000183841 122 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm27178-201ENSMUST00000184962 340 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC7.43□□□□□ -1.22
Hmgb1P63158 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm45269-201ENSMUST00000210359 282 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm45608-201ENSMUST00000210948 389 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm45888-201ENSMUST00000212348 1229 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 AC122901.2-201ENSMUST00000216926 285 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 AC153801.1-201ENSMUST00000217904 947 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC7.43□□□□□ -1.22
Hmgb1P63158 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 AC134254.4-201ENSMUST00000223086 370 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm25587-201ENSMUST00000082498 166 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Olfr685-202ENSMUST00000209409 3179 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 Agtpbp1-202ENSMUST00000109830 2879 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 Gm37216-201ENSMUST00000193817 3478 ntBASIC7.43□□□□□ -1.22
Hmgb1P63158 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Hmgb1P63158 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC7.43□□□□□ -1.22
Hmgb1P63158 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Hmgb1P63158 Ankrd55-205ENSMUST00000223871 3209 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Hmgb1P63158 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Hmgb1P63158 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Hmgb1P63158 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Hmgb1P63158 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm37607-201ENSMUST00000194925 2623 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms