Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm25164-201ENSMUST00000158908 116 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm3091-201ENSMUST00000163408 484 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm7707-201ENSMUST00000165950 1156 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm3208-201ENSMUST00000168281 427 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm18588-201ENSMUST00000177308 492 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm21577-201ENSMUST00000190823 697 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm37771-201ENSMUST00000193121 265 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 AC137678.1-201ENSMUST00000198370 118 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm7946-201ENSMUST00000203326 958 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm5154-201ENSMUST00000203971 399 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm44192-201ENSMUST00000204195 556 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm45034-201ENSMUST00000206831 482 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Odf3l1-202ENSMUST00000215694 1212 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sf3b6P59708 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm19181-201ENSMUST00000218891 940 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 AC156952.1-201ENSMUST00000220361 793 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 AC160114.1-201ENSMUST00000221930 365 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm9628-201ENSMUST00000222169 725 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 AC154649.2-201ENSMUST00000228189 808 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm9801-201ENSMUST00000054860 408 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Vmn1r177-201ENSMUST00000073967 930 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm26130-201ENSMUST00000083171 138 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm43059-201ENSMUST00000202437 1388 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sf3b6P59708 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm35208-201ENSMUST00000221590 1411 ntTSL 5 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm37010-201ENSMUST00000194539 1704 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sf3b6P59708 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sf3b6P59708 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.38□□□□□ -1.39
Sf3b6P59708 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sf3b6P59708 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sf3b6P59708 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sf3b6P59708 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Sf3b6P59708 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sf3b6P59708 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Sf3b6P59708 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sf3b6P59708 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
Sf3b6P59708 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Sf3b6P59708 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sf3b6P59708 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sf3b6P59708 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Sf3b6P59708 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
Sf3b6P59708 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sf3b6P59708 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Sf3b6P59708 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Sf3b6P59708 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC6.37□□□□□ -1.39
Sf3b6P59708 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.37□□□□□ -1.39
Sf3b6P59708 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sf3b6P59708 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sf3b6P59708 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.37□□□□□ -1.39
Sf3b6P59708 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sf3b6P59708 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sf3b6P59708 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Sf3b6P59708 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sf3b6P59708 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.37□□□□□ -1.39
Sf3b6P59708 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sf3b6P59708 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Sf3b6P59708 Gm22022-201ENSMUST00000104355 127 ntBASIC6.37□□□□□ -1.39
Sf3b6P59708 Gm23529-201ENSMUST00000104562 132 ntBASIC6.37□□□□□ -1.39
Sf3b6P59708 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
Sf3b6P59708 Gm15616-201ENSMUST00000118662 375 ntBASIC6.37□□□□□ -1.39
Sf3b6P59708 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.37□□□□□ -1.39
Sf3b6P59708 Gm12041-201ENSMUST00000121606 602 ntBASIC6.37□□□□□ -1.39
Sf3b6P59708 Gm5809-201ENSMUST00000121854 529 ntBASIC6.37□□□□□ -1.39
Sf3b6P59708 Gm16407-201ENSMUST00000122134 567 ntBASIC6.37□□□□□ -1.39
Sf3b6P59708 Mir1907-201ENSMUST00000122509 90 ntBASIC6.37□□□□□ -1.39
Sf3b6P59708 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sf3b6P59708 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sf3b6P59708 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.37□□□□□ -1.39
Sf3b6P59708 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sf3b6P59708 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms