Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Tpm1P58771 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Tpm1P58771 Gm17511-201ENSMUST00000172206 342 ntBASIC6.86□□□□□ -1.31
Tpm1P58771 Gm26509-201ENSMUST00000180947 948 ntBASIC6.86□□□□□ -1.31
Tpm1P58771 Gm9114-201ENSMUST00000188558 997 ntBASIC6.86□□□□□ -1.31
Tpm1P58771 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.86□□□□□ -1.31
Tpm1P58771 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Tpm1P58771 Gm43744-201ENSMUST00000196387 688 ntBASIC6.86□□□□□ -1.31
Tpm1P58771 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Tpm1P58771 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.86□□□□□ -1.31
Tpm1P58771 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC6.86□□□□□ -1.31
Tpm1P58771 Gm18586-201ENSMUST00000217265 518 ntBASIC6.86□□□□□ -1.31
Tpm1P58771 Gm3785-201ENSMUST00000221000 202 ntBASIC6.86□□□□□ -1.31
Tpm1P58771 Gm9321-201ENSMUST00000221179 778 ntBASIC6.86□□□□□ -1.31
Tpm1P58771 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.86□□□□□ -1.31
Tpm1P58771 AC154849.2-201ENSMUST00000223781 974 ntBASIC6.86□□□□□ -1.31
Tpm1P58771 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
Tpm1P58771 Gm6436-201ENSMUST00000077163 451 ntBASIC6.86□□□□□ -1.31
Tpm1P58771 Gm7808-201ENSMUST00000082002 387 ntBASIC6.86□□□□□ -1.31
Tpm1P58771 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Tpm1P58771 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Tpm1P58771 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Tpm1P58771 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.86□□□□□ -1.31
Tpm1P58771 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC6.86□□□□□ -1.31
Tpm1P58771 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
Tpm1P58771 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.86□□□□□ -1.31
Tpm1P58771 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC6.86□□□□□ -1.31
Tpm1P58771 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.86□□□□□ -1.31
Tpm1P58771 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.85□□□□□ -1.31
Tpm1P58771 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Tpm1P58771 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.85□□□□□ -1.31
Tpm1P58771 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Tpm1P58771 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Tpm1P58771 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Tpm1P58771 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.85□□□□□ -1.31
Tpm1P58771 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Tpm1P58771 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Tpm1P58771 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Tpm1P58771 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Tpm1P58771 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC6.85□□□□□ -1.31
Tpm1P58771 Gm13744-201ENSMUST00000118953 850 ntBASIC6.85□□□□□ -1.31
Tpm1P58771 Gm14998-201ENSMUST00000120502 495 ntBASIC6.85□□□□□ -1.31
Tpm1P58771 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC6.85□□□□□ -1.31
Tpm1P58771 Gm25277-201ENSMUST00000157266 324 ntBASIC6.85□□□□□ -1.31
Tpm1P58771 Gm25395-201ENSMUST00000157343 272 ntBASIC6.85□□□□□ -1.31
Tpm1P58771 Gm23222-201ENSMUST00000158117 76 ntBASIC6.85□□□□□ -1.31
Tpm1P58771 Gm24680-201ENSMUST00000158759 126 ntBASIC6.85□□□□□ -1.31
Tpm1P58771 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Tpm1P58771 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Tpm1P58771 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Tpm1P58771 Gm37838-201ENSMUST00000194464 312 ntBASIC6.85□□□□□ -1.31
Tpm1P58771 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Tpm1P58771 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC6.85□□□□□ -1.31
Tpm1P58771 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.85□□□□□ -1.31
Tpm1P58771 Gm45725-201ENSMUST00000212962 337 ntBASIC6.85□□□□□ -1.31
Tpm1P58771 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.85□□□□□ -1.31
Tpm1P58771 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Tpm1P58771 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Tpm1P58771 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.85□□□□□ -1.31
Tpm1P58771 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.85□□□□□ -1.31
Tpm1P58771 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Tpm1P58771 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Tpm1P58771 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Tpm1P58771 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Tpm1P58771 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.85□□□□□ -1.31
Tpm1P58771 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Tpm1P58771 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Tpm1P58771 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Tpm1P58771 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Tpm1P58771 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.85□□□□□ -1.31
Tpm1P58771 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.85□□□□□ -1.31
Tpm1P58771 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Tpm1P58771 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.84□□□□□ -1.31
Tpm1P58771 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.84□□□□□ -1.31
Tpm1P58771 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Tpm1P58771 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Tpm1P58771 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Tpm1P58771 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Tpm1P58771 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Tpm1P58771 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Tpm1P58771 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Tpm1P58771 Gm43128-201ENSMUST00000202212 1621 ntBASIC6.84□□□□□ -1.31
Tpm1P58771 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Tpm1P58771 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Tpm1P58771 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Tpm1P58771 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Tpm1P58771 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Tpm1P58771 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Tpm1P58771 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Tpm1P58771 Gm15016-201ENSMUST00000117300 720 ntBASIC6.84□□□□□ -1.31
Tpm1P58771 Gm15901-201ENSMUST00000117663 941 ntBASIC6.84□□□□□ -1.31
Tpm1P58771 Gm14733-201ENSMUST00000117680 133 ntBASIC6.84□□□□□ -1.31
Tpm1P58771 Gm5601-201ENSMUST00000118909 972 ntBASIC6.84□□□□□ -1.31
Tpm1P58771 Gm15316-201ENSMUST00000121082 421 ntBASIC6.84□□□□□ -1.31
Tpm1P58771 Gm15349-201ENSMUST00000121154 204 ntBASIC6.84□□□□□ -1.31
Tpm1P58771 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.84□□□□□ -1.31
Tpm1P58771 Gm22025-201ENSMUST00000122734 302 ntBASIC6.84□□□□□ -1.31
Tpm1P58771 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC6.84□□□□□ -1.31
Tpm1P58771 Gm25550-201ENSMUST00000158079 128 ntBASIC6.84□□□□□ -1.31
Tpm1P58771 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms