Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm7780-201ENSMUST00000214787 406 ntBASIC5.79□□□□□ -1.48
Cdh11P55288 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.79□□□□□ -1.48
Cdh11P55288 AC172027.1-201ENSMUST00000217659 337 ntBASIC5.79□□□□□ -1.48
Cdh11P55288 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC5.79□□□□□ -1.48
Cdh11P55288 Gm18601-201ENSMUST00000220831 634 ntBASIC5.79□□□□□ -1.48
Cdh11P55288 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdh11P55288 AC132260.1-201ENSMUST00000225499 734 ntBASIC5.79□□□□□ -1.48
Cdh11P55288 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.79□□□□□ -1.48
Cdh11P55288 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdh11P55288 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdh11P55288 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Cdh11P55288 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdh11P55288 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Cdh11P55288 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdh11P55288 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Cdh11P55288 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
Cdh11P55288 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Cdh11P55288 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Cdh11P55288 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdh11P55288 Gm43410-201ENSMUST00000197510 2234 ntBASIC5.79□□□□□ -1.48
Cdh11P55288 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdh11P55288 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Cdh11P55288 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC5.79□□□□□ -1.48
Cdh11P55288 Gm43842-201ENSMUST00000202890 2982 ntBASIC5.79□□□□□ -1.48
Cdh11P55288 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Cdh11P55288 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.79□□□□□ -1.48
Cdh11P55288 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Cdh11P55288 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Cdh11P55288 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Cdh11P55288 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Cdh11P55288 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdh11P55288 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Gm9575-201ENSMUST00000122140 1339 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Cdh11P55288 Gm42611-201ENSMUST00000199446 3407 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdh11P55288 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Cdh11P55288 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdh11P55288 Gm13176-201ENSMUST00000117910 477 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Gm13338-201ENSMUST00000120235 361 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Gm7113-201ENSMUST00000120477 958 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Gm15164-201ENSMUST00000122203 271 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC5.78□□□□□ -1.48
Cdh11P55288 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cdh11P55288 Gm15275-201ENSMUST00000154752 347 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Mir1953-201ENSMUST00000157866 89 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Gm22311-201ENSMUST00000158006 110 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC5.78□□□□□ -1.48
Cdh11P55288 Gm18808-201ENSMUST00000173316 462 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cdh11P55288 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Cdh11P55288 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Cdh11P55288 Gm29464-201ENSMUST00000187692 513 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Cdh11P55288 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC5.78□□□□□ -1.48
Cdh11P55288 Gm35323-201ENSMUST00000191836 499 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Gm37541-201ENSMUST00000192464 2315 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Gm37078-201ENSMUST00000193314 2009 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cdh11P55288 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Cdh11P55288 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC5.78□□□□□ -1.48
Cdh11P55288 Gm9685-201ENSMUST00000211275 538 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Cdh11P55288 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.78□□□□□ -1.48
Cdh11P55288 Gm9293-201ENSMUST00000223096 306 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 AC091237.1-201ENSMUST00000224911 637 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 AC116596.2-203ENSMUST00000227345 731 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdh11P55288 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdh11P55288 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
Cdh11P55288 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Cdh11P55288 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Gm42881-201ENSMUST00000198636 3344 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdh11P55288 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdh11P55288 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdh11P55288 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdh11P55288 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.78□□□□□ -1.48
Cdh11P55288 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cdh11P55288 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Cdh11P55288 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
Cdh11P55288 Gm43128-201ENSMUST00000202212 1621 ntBASIC5.77□□□□□ -1.48
Cdh11P55288 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.77□□□□□ -1.49
Cdh11P55288 AC121960.2-201ENSMUST00000227349 3446 ntBASIC5.77□□□□□ -1.49
Cdh11P55288 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdh11P55288 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdh11P55288 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Cdh11P55288 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdh11P55288 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cdh11P55288 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdh11P55288 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cdh11P55288 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.77□□□□□ -1.49
Cdh11P55288 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cdh11P55288 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cdh11P55288 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cdh11P55288 Mir674-201ENSMUST00000102421 100 ntBASIC5.77□□□□□ -1.49
Cdh11P55288 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms