Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.05□□□□□ -1.44
Cdx2P43241 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
Cdx2P43241 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cdx2P43241 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx2P43241 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx2P43241 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx2P43241 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx2P43241 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx2P43241 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx2P43241 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Cdx2P43241 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.05□□□□□ -1.44
Cdx2P43241 Gm14550-201ENSMUST00000117918 407 ntBASIC6.05□□□□□ -1.44
Cdx2P43241 Gm25445-201ENSMUST00000158996 299 ntBASIC6.05□□□□□ -1.44
Cdx2P43241 Gm6472-201ENSMUST00000178147 651 ntBASIC6.05□□□□□ -1.44
Cdx2P43241 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cdx2P43241 Gm38181-201ENSMUST00000181357 720 ntBASIC6.05□□□□□ -1.44
Cdx2P43241 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx2P43241 Gm28080-201ENSMUST00000188552 722 ntBASIC6.05□□□□□ -1.44
Cdx2P43241 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx2P43241 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6.05□□□□□ -1.44
Cdx2P43241 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.05□□□□□ -1.44
Cdx2P43241 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.05□□□□□ -1.44
Cdx2P43241 AC172989.1-201ENSMUST00000226387 513 ntBASIC6.05□□□□□ -1.44
Cdx2P43241 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Cdx2P43241 Mir484-201ENSMUST00000093566 67 ntBASIC6.05□□□□□ -1.44
Cdx2P43241 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Cdx2P43241 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx2P43241 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Cdx2P43241 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx2P43241 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.05□□□□□ -1.44
Cdx2P43241 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.05□□□□□ -1.44
Cdx2P43241 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.05□□□□□ -1.44
Cdx2P43241 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx2P43241 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx2P43241 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.05□□□□□ -1.44
Cdx2P43241 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx2P43241 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Cdx2P43241 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx2P43241 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.05□□□□□ -1.44
Cdx2P43241 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx2P43241 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx2P43241 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Cdx2P43241 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Cdx2P43241 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx2P43241 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx2P43241 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdx2P43241 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdx2P43241 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx2P43241 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx2P43241 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx2P43241 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx2P43241 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 Gm8761-201ENSMUST00000121507 955 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 Gm14212-201ENSMUST00000122023 826 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 Gm8061-201ENSMUST00000122380 350 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.04□□□□□ -1.44
Cdx2P43241 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdx2P43241 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.04□□□□□ -1.44
Cdx2P43241 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx2P43241 Gm3841-201ENSMUST00000191399 451 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdx2P43241 Gm46223-201ENSMUST00000215196 675 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 Gm36262-201ENSMUST00000223274 499 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdx2P43241 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx2P43241 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdx2P43241 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Cdx2P43241 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx2P43241 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx2P43241 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Cdx2P43241 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx2P43241 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx2P43241 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx2P43241 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx2P43241 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.04□□□□□ -1.44
Cdx2P43241 AC158115.1-201ENSMUST00000222830 3182 ntBASIC6.04□□□□□ -1.44
Cdx2P43241 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Cdx2P43241 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.03□□□□□ -1.44
Cdx2P43241 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx2P43241 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx2P43241 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.03□□□□□ -1.44
Cdx2P43241 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.03□□□□□ -1.44
Cdx2P43241 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.03□□□□□ -1.44
Cdx2P43241 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx2P43241 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx2P43241 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Cdx2P43241 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx2P43241 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx2P43241 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Cdx2P43241 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms