Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VhlP40338 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.12□□□□□ -1.59
VhlP40338 Gm25396-201ENSMUST00000103981 133 ntBASIC5.12□□□□□ -1.59
VhlP40338 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VhlP40338 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
VhlP40338 Gm15901-201ENSMUST00000117663 941 ntBASIC5.12□□□□□ -1.59
VhlP40338 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Gm12375-201ENSMUST00000119331 921 ntBASIC5.12□□□□□ -1.59
VhlP40338 Gm11504-201ENSMUST00000120211 173 ntBASIC5.12□□□□□ -1.59
VhlP40338 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC5.12□□□□□ -1.59
VhlP40338 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC5.12□□□□□ -1.59
VhlP40338 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC5.12□□□□□ -1.59
VhlP40338 Gm24545-201ENSMUST00000158651 85 ntBASIC5.12□□□□□ -1.59
VhlP40338 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.12□□□□□ -1.59
VhlP40338 Gm2619-202ENSMUST00000166777 651 ntBASIC5.12□□□□□ -1.59
VhlP40338 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Gm27193-201ENSMUST00000184217 586 ntBASIC5.12□□□□□ -1.59
VhlP40338 Gm27299-201ENSMUST00000184593 103 ntBASIC5.12□□□□□ -1.59
VhlP40338 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
VhlP40338 Gm8009-201ENSMUST00000191672 436 ntBASIC5.12□□□□□ -1.59
VhlP40338 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VhlP40338 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC5.12□□□□□ -1.59
VhlP40338 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.12□□□□□ -1.59
VhlP40338 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC5.12□□□□□ -1.59
VhlP40338 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.12□□□□□ -1.59
VhlP40338 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VhlP40338 Gm19047-201ENSMUST00000220922 1099 ntBASIC5.12□□□□□ -1.59
VhlP40338 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.12□□□□□ -1.59
VhlP40338 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC5.12□□□□□ -1.59
VhlP40338 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.12□□□□□ -1.59
VhlP40338 Gm6575-201ENSMUST00000222946 697 ntBASIC5.12□□□□□ -1.59
VhlP40338 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.12□□□□□ -1.59
VhlP40338 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Gm9985-201ENSMUST00000044101 510 ntBASIC5.12□□□□□ -1.59
VhlP40338 Gm5446-201ENSMUST00000091762 784 ntBASIC5.12□□□□□ -1.59
VhlP40338 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VhlP40338 Gm6419-201ENSMUST00000097166 429 ntBASIC5.12□□□□□ -1.59
VhlP40338 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VhlP40338 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VhlP40338 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VhlP40338 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.12□□□□□ -1.59
VhlP40338 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.12□□□□□ -1.59
VhlP40338 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.12□□□□□ -1.59
VhlP40338 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.12□□□□□ -1.59
VhlP40338 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VhlP40338 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VhlP40338 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VhlP40338 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.12□□□□□ -1.59
VhlP40338 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VhlP40338 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
VhlP40338 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VhlP40338 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC5.11□□□□□ -1.59
VhlP40338 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.11□□□□□ -1.59
VhlP40338 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VhlP40338 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VhlP40338 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC5.11□□□□□ -1.59
VhlP40338 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC5.11□□□□□ -1.59
VhlP40338 Gm8855-201ENSMUST00000118888 878 ntBASIC5.11□□□□□ -1.59
VhlP40338 Gm6884-201ENSMUST00000119318 615 ntBASIC5.11□□□□□ -1.59
VhlP40338 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC5.11□□□□□ -1.59
VhlP40338 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC5.11□□□□□ -1.59
VhlP40338 Gm13877-201ENSMUST00000120614 417 ntBASIC5.11□□□□□ -1.59
VhlP40338 Gm12535-201ENSMUST00000121025 484 ntBASIC5.11□□□□□ -1.59
VhlP40338 Gm3810-201ENSMUST00000122413 476 ntBASIC5.11□□□□□ -1.59
VhlP40338 Gm8648-201ENSMUST00000122457 221 ntBASIC5.11□□□□□ -1.59
VhlP40338 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC5.11□□□□□ -1.59
VhlP40338 Gm25487-201ENSMUST00000158725 125 ntBASIC5.11□□□□□ -1.59
VhlP40338 Gm22533-201ENSMUST00000158821 274 ntBASIC5.11□□□□□ -1.59
VhlP40338 Gm24300-201ENSMUST00000177809 109 ntBASIC5.11□□□□□ -1.59
VhlP40338 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC5.11□□□□□ -1.59
VhlP40338 Gm24017-201ENSMUST00000178726 109 ntBASIC5.11□□□□□ -1.59
VhlP40338 Gm4845-201ENSMUST00000179202 562 ntBASIC5.11□□□□□ -1.59
VhlP40338 Gm23952-201ENSMUST00000179380 109 ntBASIC5.11□□□□□ -1.59
VhlP40338 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VhlP40338 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VhlP40338 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC5.11□□□□□ -1.59
VhlP40338 Mir6908-201ENSMUST00000184056 63 ntBASIC5.11□□□□□ -1.59
VhlP40338 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VhlP40338 Ighv5-5-201ENSMUST00000193826 329 ntBASIC5.11□□□□□ -1.59
VhlP40338 Gm17895-201ENSMUST00000194028 874 ntBASIC5.11□□□□□ -1.59
VhlP40338 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC5.11□□□□□ -1.59
VhlP40338 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VhlP40338 Gm5050-201ENSMUST00000197164 775 ntBASIC5.11□□□□□ -1.59
VhlP40338 Gm17824-201ENSMUST00000197690 805 ntBASIC5.11□□□□□ -1.59
VhlP40338 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VhlP40338 Gm18559-201ENSMUST00000208249 604 ntBASIC5.11□□□□□ -1.59
VhlP40338 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms