Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cxcl12P40224 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Cxcl12P40224 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm43314-201ENSMUST00000196744 2231 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm38029-201ENSMUST00000192669 2090 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm5381-201ENSMUST00000117975 1250 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm8545-201ENSMUST00000120692 801 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm14300-201ENSMUST00000120800 946 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm13533-201ENSMUST00000121104 177 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm22596-201ENSMUST00000157601 316 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm23224-201ENSMUST00000158122 271 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm16269-201ENSMUST00000160532 409 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Mirt2-201ENSMUST00000175179 285 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC6.53□□□□□ -1.36
Cxcl12P40224 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm21728-201ENSMUST00000188442 695 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm21889-201ENSMUST00000188487 695 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm21920-201ENSMUST00000190042 695 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm28640-201ENSMUST00000190918 550 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm44382-201ENSMUST00000198683 122 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.53□□□□□ -1.36
Cxcl12P40224 AC156950.1-201ENSMUST00000219604 456 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 AC168056.2-201ENSMUST00000223591 269 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 CT025642.2-201ENSMUST00000225009 1649 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Cxcl12P40224 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cxcl12P40224 AC140280.1-201ENSMUST00000227826 1847 ntBASIC6.53□□□□□ -1.36
Cxcl12P40224 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
Cxcl12P40224 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cxcl12P40224 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cxcl12P40224 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cxcl12P40224 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Cxcl12P40224 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cxcl12P40224 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cxcl12P40224 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cxcl12P40224 AC154461.6-201ENSMUST00000224815 2630 ntBASIC6.52□□□□□ -1.37
Cxcl12P40224 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cxcl12P40224 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cxcl12P40224 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cxcl12P40224 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
Cxcl12P40224 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC6.52□□□□□ -1.37
Cxcl12P40224 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Cxcl12P40224 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
Cxcl12P40224 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cxcl12P40224 Lipe-203ENSMUST00000105177 1251 ntBASIC6.52□□□□□ -1.37
Cxcl12P40224 Gm13579-201ENSMUST00000118519 517 ntBASIC6.52□□□□□ -1.37
Cxcl12P40224 Gm11894-201ENSMUST00000121579 328 ntBASIC6.52□□□□□ -1.37
Cxcl12P40224 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.52□□□□□ -1.37
Cxcl12P40224 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cxcl12P40224 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cxcl12P40224 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC6.52□□□□□ -1.37
Cxcl12P40224 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.52□□□□□ -1.37
Cxcl12P40224 Gm7780-201ENSMUST00000214787 406 ntBASIC6.52□□□□□ -1.37
Cxcl12P40224 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Cxcl12P40224 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Cxcl12P40224 CT030238.4-203ENSMUST00000227343 836 ntBASIC6.52□□□□□ -1.37
Cxcl12P40224 AC123665.6-201ENSMUST00000228568 538 ntBASIC6.52□□□□□ -1.37
Cxcl12P40224 Mir331-201ENSMUST00000083673 96 ntBASIC6.52□□□□□ -1.37
Cxcl12P40224 Gm17137-201ENSMUST00000164106 4371 ntBASIC6.52□□□□□ -1.37
Cxcl12P40224 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.52□□□□□ -1.37
Cxcl12P40224 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms