Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
P20040 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
P20040 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
P20040 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
P20040 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC5.58□□□□□ -1.52
P20040 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
P20040 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Gm22284-201ENSMUST00000104132 132 ntBASIC5.58□□□□□ -1.52
P20040 Rnu11-201ENSMUST00000104135 134 ntBASIC5.58□□□□□ -1.52
P20040 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC5.58□□□□□ -1.52
P20040 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.58□□□□□ -1.52
P20040 Gm5793-201ENSMUST00000119393 630 ntBASIC5.58□□□□□ -1.52
P20040 Gm13207-201ENSMUST00000119862 773 ntBASIC5.58□□□□□ -1.52
P20040 Gm11485-201ENSMUST00000120048 1175 ntBASIC5.58□□□□□ -1.52
P20040 Gm3810-201ENSMUST00000122413 476 ntBASIC5.58□□□□□ -1.52
P20040 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC5.58□□□□□ -1.52
P20040 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC5.58□□□□□ -1.52
P20040 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Esd-ps-201ENSMUST00000170684 847 ntBASIC5.58□□□□□ -1.52
P20040 Gm23968-201ENSMUST00000175047 125 ntBASIC5.58□□□□□ -1.52
P20040 Gm24812-201ENSMUST00000175315 284 ntBASIC5.58□□□□□ -1.52
P20040 Gm9274-201ENSMUST00000182505 984 ntBASIC5.58□□□□□ -1.52
P20040 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.58□□□□□ -1.52
P20040 Mir7685-201ENSMUST00000183555 62 ntBASIC5.58□□□□□ -1.52
P20040 Mir6348-201ENSMUST00000183804 120 ntBASIC5.58□□□□□ -1.52
P20040 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5.58□□□□□ -1.52
P20040 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Gm18447-201ENSMUST00000187501 307 ntBASIC5.58□□□□□ -1.52
P20040 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Gm29784-201ENSMUST00000196217 406 ntBASIC5.58□□□□□ -1.52
P20040 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
P20040 AC117240.1-201ENSMUST00000199436 61 ntBASIC5.58□□□□□ -1.52
P20040 Gm5324-201ENSMUST00000208115 476 ntBASIC5.58□□□□□ -1.52
P20040 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC5.58□□□□□ -1.52
P20040 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.58□□□□□ -1.52
P20040 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.58□□□□□ -1.52
P20040 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.58□□□□□ -1.52
P20040 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.58□□□□□ -1.52
P20040 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.58□□□□□ -1.52
P20040 AC154806.5-205ENSMUST00000228828 411 ntBASIC5.58□□□□□ -1.52
P20040 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Gm45424-201ENSMUST00000210575 3300 ntBASIC5.58□□□□□ -1.52
P20040 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Gm38081-201ENSMUST00000192680 1645 ntBASIC5.58□□□□□ -1.52
P20040 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
P20040 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
P20040 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.58□□□□□ -1.52
P20040 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
P20040 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
P20040 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
P20040 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.58□□□□□ -1.52
P20040 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.57□□□□□ -1.52
P20040 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Gm15789-201ENSMUST00000118992 1359 ntBASIC5.57□□□□□ -1.52
P20040 Gm37100-201ENSMUST00000193344 1353 ntBASIC5.57□□□□□ -1.52
P20040 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
P20040 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
P20040 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
P20040 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC5.57□□□□□ -1.52
P20040 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
P20040 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
P20040 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
P20040 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
P20040 Gm12229-201ENSMUST00000120487 468 ntBASIC5.57□□□□□ -1.52
P20040 Gm8722-201ENSMUST00000121466 769 ntBASIC5.57□□□□□ -1.52
P20040 Gm12152-201ENSMUST00000122465 684 ntBASIC5.57□□□□□ -1.52
P20040 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC5.57□□□□□ -1.52
P20040 Gm22094-201ENSMUST00000158976 117 ntBASIC5.57□□□□□ -1.52
P20040 Gm9064-201ENSMUST00000163579 566 ntBASIC5.57□□□□□ -1.52
P20040 Gm11107-201ENSMUST00000165414 505 ntBASIC5.57□□□□□ -1.52
P20040 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
P20040 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC5.57□□□□□ -1.52
P20040 AC122844.1-201ENSMUST00000195971 107 ntBASIC5.57□□□□□ -1.52
P20040 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC5.57□□□□□ -1.52
P20040 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC5.57□□□□□ -1.52
P20040 Gm17908-201ENSMUST00000205552 1256 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms