Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm14615-201ENSMUST00000117575 1816 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
Cdx1P18111 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Cdx1P18111 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.2□□□□□ -1.58
Cdx1P18111 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Cdx1P18111 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
Cdx1P18111 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm13798-201ENSMUST00000118285 139 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Gm14727-201ENSMUST00000118526 525 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Gm14721-201ENSMUST00000121381 525 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Gm13282-201ENSMUST00000121577 545 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Gm8089-201ENSMUST00000122463 968 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Gm26480-201ENSMUST00000122619 297 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC5.2□□□□□ -1.58
Cdx1P18111 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm25660-201ENSMUST00000158470 104 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC5.2□□□□□ -1.58
Cdx1P18111 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm17212-201ENSMUST00000166666 259 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm20614-201ENSMUST00000177106 632 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm27014-201ENSMUST00000182658 937 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Mir7033-201ENSMUST00000184259 81 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm18799-201ENSMUST00000189104 913 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm30517-201ENSMUST00000197350 772 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm18907-201ENSMUST00000209719 932 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC5.2□□□□□ -1.58
Cdx1P18111 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 AC105169.1-201ENSMUST00000218912 1294 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm46424-201ENSMUST00000221567 168 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm18960-201ENSMUST00000222962 713 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 AC159205.2-201ENSMUST00000223759 816 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 AC124489.1-201ENSMUST00000225852 526 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm15732-201ENSMUST00000079794 480 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.2□□□□□ -1.58
Cdx1P18111 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.2□□□□□ -1.58
Cdx1P18111 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Cdx1P18111 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Cdx1P18111 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Cdx1P18111 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Cdx1P18111 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Cdx1P18111 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cdx1P18111 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Cdx1P18111 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC5.19□□□□□ -1.58
Cdx1P18111 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm25498-201ENSMUST00000104424 129 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Gm11200-201ENSMUST00000121698 448 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm25116-201ENSMUST00000157191 122 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Gm23891-201ENSMUST00000158114 138 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm3585-201ENSMUST00000173438 875 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 n-R5s93-201ENSMUST00000180091 119 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm5272-201ENSMUST00000182730 982 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm9114-201ENSMUST00000188558 997 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms