Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Lire1P11260 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Lire1P11260 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Lire1P11260 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.31□□□□□ -1.4
Lire1P11260 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Lire1P11260 Pramel-201ENSMUST00000118979 1383 ntBASIC6.31□□□□□ -1.4
Lire1P11260 Gm43466-201ENSMUST00000197836 5214 ntBASIC6.31□□□□□ -1.4
Lire1P11260 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lire1P11260 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Lire1P11260 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lire1P11260 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Lire1P11260 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lire1P11260 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lire1P11260 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm15189-201ENSMUST00000121164 1966 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gm37356-201ENSMUST00000193362 1613 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm26417-201ENSMUST00000104274 135 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gm12175-201ENSMUST00000122081 345 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gm22275-201ENSMUST00000122470 310 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Lire1P11260 Gm12504-202ENSMUST00000148026 306 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm17022-201ENSMUST00000166415 922 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gm4202-201ENSMUST00000169025 733 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gm27360-201ENSMUST00000183487 80 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm8480-201ENSMUST00000190350 698 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gm19057-201ENSMUST00000194329 1197 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gm19596-201ENSMUST00000203685 739 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm21112-201ENSMUST00000212224 578 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gm7760-201ENSMUST00000212265 578 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gm7807-201ENSMUST00000212475 578 ntBASIC6.3□□□□□ -1.4
Lire1P11260 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm46231-201ENSMUST00000220152 314 ntBASIC6.3□□□□□ -1.4
Lire1P11260 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Lire1P11260 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm18960-201ENSMUST00000222962 713 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gm2754-201ENSMUST00000223383 589 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Lire1P11260 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.3□□□□□ -1.4
Lire1P11260 AC170999.2-201ENSMUST00000226223 264 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lire1P11260 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm16020-201ENSMUST00000084281 210 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
Lire1P11260 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lire1P11260 Gm37766-201ENSMUST00000192244 2567 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Lire1P11260 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Lire1P11260 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Lire1P11260 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Lire1P11260 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.3□□□□□ -1.4
Lire1P11260 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Lire1P11260 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Lire1P11260 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Lire1P11260 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC6.29□□□□□ -1.4
Lire1P11260 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC6.29□□□□□ -1.4
Lire1P11260 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.29□□□□□ -1.4
Lire1P11260 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Lire1P11260 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms