Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm26469-201ENSMUST00000116765 121 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm13439-201ENSMUST00000117541 409 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm13407-201ENSMUST00000118256 360 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm15231-201ENSMUST00000119174 447 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm14927-201ENSMUST00000120283 454 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm12599-201ENSMUST00000120534 792 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm25294-201ENSMUST00000122791 104 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Fam229b-203ENSMUST00000125042 707 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm22562-201ENSMUST00000157334 111 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm22842-201ENSMUST00000157709 118 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm6726-201ENSMUST00000172786 681 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm24083-201ENSMUST00000175174 120 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Mup-ps7-201ENSMUST00000178292 545 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Mup-ps8-201ENSMUST00000178663 545 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Mup-ps9-201ENSMUST00000178847 545 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Mup-ps6-201ENSMUST00000179564 545 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm26925-201ENSMUST00000182470 957 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Ighv1-10-201ENSMUST00000194372 355 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm44721-201ENSMUST00000206978 472 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm19033-201ENSMUST00000208516 964 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm45474-201ENSMUST00000209471 408 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm10043-201ENSMUST00000210691 235 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 AC154296.2-201ENSMUST00000214696 545 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm18378-201ENSMUST00000216245 628 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Hoxd3P09027 BC061195-201ENSMUST00000088133 577 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 1700003E24Rik-201ENSMUST00000088134 577 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm21286-201ENSMUST00000098035 545 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm43800-201ENSMUST00000201868 2731 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm10069-201ENSMUST00000144745 3694 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Vwa3b-203ENSMUST00000117172 1636 ntAPPRIS P5 TSL 2 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Btbd16-201ENSMUST00000048453 3434 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm42549-201ENSMUST00000202392 7004 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC6.27□□□□□ -1.41
Hoxd3P09027 AC122878.1-201ENSMUST00000227716 1460 ntBASIC6.27□□□□□ -1.41
Hoxd3P09027 Pum3-201ENSMUST00000076219 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Pclaf-201ENSMUST00000045802 2188 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hoxd3P09027 Zfp961-201ENSMUST00000109997 2713 ntAPPRIS P2 TSL 2 BASIC6.27□□□□□ -1.41
Hoxd3P09027 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm43621-201ENSMUST00000202733 2022 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Icosl-201ENSMUST00000105393 2814 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Malat1-201ENSMUST00000172812 6983 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm8836-201ENSMUST00000198196 1348 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 141.7 ms