Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm12344-201ENSMUST00000117087 329 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm7831-201ENSMUST00000117990 552 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm6491-201ENSMUST00000118273 990 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm11259-201ENSMUST00000120554 715 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm14979-201ENSMUST00000121561 1035 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm15843-201ENSMUST00000146593 529 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm20797-201ENSMUST00000177894 383 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm27762-201ENSMUST00000183417 109 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Mir6409-201ENSMUST00000184957 92 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm28665-201ENSMUST00000189269 670 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm7341-201ENSMUST00000192183 926 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm6077-201ENSMUST00000196008 499 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm45174-201ENSMUST00000208884 3065 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 AC154681.1-201ENSMUST00000225876 1735 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 CT009515.1-201ENSMUST00000228127 586 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 AC157572.4-201ENSMUST00000228203 549 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 AC130219.2-201ENSMUST00000228765 807 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Pcdh1F7BJK1 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Mir763-201ENSMUST00000103249 120 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm24373-201ENSMUST00000104393 132 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm11558-201ENSMUST00000118454 459 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm15233-201ENSMUST00000118747 400 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm12219-201ENSMUST00000119198 443 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm15488-201ENSMUST00000121682 670 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm16248-201ENSMUST00000124238 243 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm24393-201ENSMUST00000158135 97 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Gm24883-201ENSMUST00000158391 281 ntBASIC6.28□□□□□ -1.4
Pcdh1F7BJK1 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms