Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm16112-201ENSMUST00000159075 382 ntBASIC5.29□□□□□ -1.56
Col6a4A2AX52 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.29□□□□□ -1.56
Col6a4A2AX52 Gm8895-201ENSMUST00000172300 1223 ntBASIC5.29□□□□□ -1.56
Col6a4A2AX52 Mir7006-201ENSMUST00000183624 69 ntBASIC5.29□□□□□ -1.56
Col6a4A2AX52 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a4A2AX52 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a4A2AX52 Gm29454-201ENSMUST00000190805 393 ntBASIC5.29□□□□□ -1.56
Col6a4A2AX52 Gm46192-201ENSMUST00000217894 326 ntBASIC5.29□□□□□ -1.56
Col6a4A2AX52 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a4A2AX52 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.29□□□□□ -1.56
Col6a4A2AX52 Gm9231-201ENSMUST00000220817 1009 ntBASIC5.29□□□□□ -1.56
Col6a4A2AX52 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.29□□□□□ -1.56
Col6a4A2AX52 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.29□□□□□ -1.56
Col6a4A2AX52 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Col6a4A2AX52 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Col6a4A2AX52 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a4A2AX52 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a4A2AX52 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a4A2AX52 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm37730-201ENSMUST00000192432 2211 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm45457-201ENSMUST00000209931 3089 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm36981-201ENSMUST00000192340 4485 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm15531-201ENSMUST00000118062 252 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm15158-201ENSMUST00000120577 570 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm12685-201ENSMUST00000121702 214 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm28750-201ENSMUST00000186327 658 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm37235-201ENSMUST00000195171 59 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm4374-201ENSMUST00000204929 424 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a4A2AX52 AC151971.3-201ENSMUST00000214694 404 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm22592-201ENSMUST00000104242 131 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm22952-201ENSMUST00000116720 120 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm14746-201ENSMUST00000120309 741 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm17142-201ENSMUST00000164933 645 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Mir5125-201ENSMUST00000175240 79 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Col6a4A2AX52 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm17918-201ENSMUST00000205315 574 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Col6a4A2AX52 Mir188-201ENSMUST00000083464 68 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Gm9403-201ENSMUST00000196299 2181 ntBASIC5.28□□□□□ -1.56
Col6a4A2AX52 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC5.27□□□□□ -1.57
Col6a4A2AX52 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a4A2AX52 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.27□□□□□ -1.57
Col6a4A2AX52 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.27□□□□□ -1.57
Col6a4A2AX52 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a4A2AX52 AC159635.1-201ENSMUST00000220905 2102 ntBASIC5.27□□□□□ -1.57
Col6a4A2AX52 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Gm2199-201ENSMUST00000119065 874 ntBASIC5.27□□□□□ -1.57
Col6a4A2AX52 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.27□□□□□ -1.57
Col6a4A2AX52 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Gm36935-201ENSMUST00000192526 292 ntBASIC5.27□□□□□ -1.57
Col6a4A2AX52 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC5.27□□□□□ -1.57
Col6a4A2AX52 Gm33601-201ENSMUST00000210001 961 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 109.8 ms