Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm4927-201ENSMUST00000219548 1318 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm26289-201ENSMUST00000104169 131 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm13626-201ENSMUST00000119435 402 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm15181-201ENSMUST00000120142 177 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm8722-201ENSMUST00000121466 769 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm25962-201ENSMUST00000157173 168 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm26486-201ENSMUST00000158021 110 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm24155-201ENSMUST00000175259 110 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm24812-201ENSMUST00000175315 284 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm38237-201ENSMUST00000193366 376 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm37477-201ENSMUST00000195215 884 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm43048-201ENSMUST00000196101 388 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm5050-201ENSMUST00000197164 775 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm9293-201ENSMUST00000223096 306 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 AC091783.3-201ENSMUST00000223969 681 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
Cldn3Q9Z0G9 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm22231-201ENSMUST00000101027 73 ntBASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm12442-201ENSMUST00000118372 338 ntBASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm24359-201ENSMUST00000158418 221 ntBASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm18700-201ENSMUST00000185791 553 ntBASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm9127-201ENSMUST00000188041 985 ntBASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm38177-201ENSMUST00000192213 1040 ntBASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm8869-201ENSMUST00000195222 947 ntBASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm43157-201ENSMUST00000198223 412 ntBASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm30708-201ENSMUST00000202183 312 ntBASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Cldn3Q9Z0G9 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.34□□□□□ -1.4
Cldn3Q9Z0G9 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.34□□□□□ -1.4
Cldn3Q9Z0G9 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Cldn3Q9Z0G9 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Cldn3Q9Z0G9 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Cldn3Q9Z0G9 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.33□□□□□ -1.4
Cldn3Q9Z0G9 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Cldn3Q9Z0G9 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cldn3Q9Z0G9 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.33□□□□□ -1.4
Cldn3Q9Z0G9 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cldn3Q9Z0G9 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms