Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm25675-201ENSMUST00000174979 118 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim3Q9R1R2 n-R5s109-201ENSMUST00000179195 119 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm21614-201ENSMUST00000183260 1005 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Mir6367-201ENSMUST00000183385 102 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm27970-201ENSMUST00000184854 407 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm8502-201ENSMUST00000185708 901 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm21147-201ENSMUST00000186046 913 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6□□□□□ -1.45
Trim3Q9R1R2 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm5324-201ENSMUST00000208115 476 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm4556-201ENSMUST00000217808 355 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC6□□□□□ -1.45
Trim3Q9R1R2 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 AC154806.1-203ENSMUST00000227370 1032 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6□□□□□ -1.45
Trim3Q9R1R2 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm5341-201ENSMUST00000058881 489 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim3Q9R1R2 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim3Q9R1R2 Gm28392-201ENSMUST00000077630 393 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Pramel-201ENSMUST00000118979 1383 ntBASIC6□□□□□ -1.45
Trim3Q9R1R2 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim3Q9R1R2 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim3Q9R1R2 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Trim3Q9R1R2 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6□□□□□ -1.45
Trim3Q9R1R2 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Trim3Q9R1R2 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim3Q9R1R2 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim3Q9R1R2 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim3Q9R1R2 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 AC130831.1-201ENSMUST00000224546 1474 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm24888-201ENSMUST00000104387 130 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm15621-201ENSMUST00000119162 364 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 M6pr-ps-201ENSMUST00000120481 830 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm8648-201ENSMUST00000122457 221 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm6081-201ENSMUST00000134472 489 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm23071-201ENSMUST00000158242 115 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm43048-201ENSMUST00000196101 388 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm44265-201ENSMUST00000203631 465 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm18838-201ENSMUST00000204855 886 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm45343-201ENSMUST00000210452 828 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm7780-201ENSMUST00000214787 406 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 AC124601.1-201ENSMUST00000220531 135 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 CT030254.1-201ENSMUST00000225450 1078 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 AC158750.1-201ENSMUST00000226163 634 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 AC174678.3-201ENSMUST00000227568 362 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm21731-201ENSMUST00000079524 489 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Trim3Q9R1R2 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.98□□□□□ -1.45
Trim3Q9R1R2 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms