Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm26422-201ENSMUST00000104276 132 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm24790-201ENSMUST00000104285 132 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm11617-201ENSMUST00000119609 639 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm15750-201ENSMUST00000120970 616 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm12175-201ENSMUST00000122081 345 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm23888-201ENSMUST00000122690 253 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm25281-201ENSMUST00000157270 104 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm10136-201ENSMUST00000183196 435 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm19480-201ENSMUST00000185547 667 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm18447-201ENSMUST00000187501 307 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm38068-201ENSMUST00000192546 540 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm2229-201ENSMUST00000193328 710 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm8190-201ENSMUST00000199603 586 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm18559-201ENSMUST00000208249 604 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm17994-201ENSMUST00000209260 533 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 AC132384.8-201ENSMUST00000218152 1204 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 AC102676.1-201ENSMUST00000228131 719 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Gm38257-201ENSMUST00000195881 2761 ntBASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Lima1Q9ERG0 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Gm14733-201ENSMUST00000117680 133 ntBASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Gm11504-201ENSMUST00000120211 173 ntBASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Gm12540-201ENSMUST00000121938 319 ntBASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Gm7613-201ENSMUST00000139070 487 ntBASIC6.12□□□□□ -1.43
Lima1Q9ERG0 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Gm22701-201ENSMUST00000175371 291 ntBASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Gm37477-201ENSMUST00000195215 884 ntBASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.12□□□□□ -1.43
Lima1Q9ERG0 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.12□□□□□ -1.43
Lima1Q9ERG0 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm5601-201ENSMUST00000118909 972 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm23426-201ENSMUST00000122483 318 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm25550-201ENSMUST00000158079 128 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm26211-201ENSMUST00000158578 129 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm17121-201ENSMUST00000170414 847 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm25675-201ENSMUST00000174979 118 ntBASIC6.11□□□□□ -1.43
Lima1Q9ERG0 Gm23632-201ENSMUST00000175289 125 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms