Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm15164-201ENSMUST00000122203 271 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Gm12504-202ENSMUST00000148026 306 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Gm16269-201ENSMUST00000160532 409 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Gm6541-201ENSMUST00000165542 561 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Gm8367-201ENSMUST00000186145 887 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Gm9127-201ENSMUST00000188041 985 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Gm37774-201ENSMUST00000194401 245 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Gm44837-201ENSMUST00000206863 717 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Rfpl4-203ENSMUST00000208468 1238 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Gm8290-201ENSMUST00000218202 477 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Xpo7-203ENSMUST00000226448 3663 ntBASIC6.43□□□□□ -1.38
Cpne8Q9DC53 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm12439-201ENSMUST00000117162 365 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm5843-201ENSMUST00000121631 476 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm5430-201ENSMUST00000182525 915 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm21614-201ENSMUST00000183260 1005 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm43354-201ENSMUST00000196862 346 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm21048-201ENSMUST00000202470 1166 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm17908-201ENSMUST00000205552 1256 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm45448-201ENSMUST00000211739 209 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Mir7b-201ENSMUST00000083557 111 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.42□□□□□ -1.38
Cpne8Q9DC53 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cpne8Q9DC53 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cpne8Q9DC53 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC6.41□□□□□ -1.38
Cpne8Q9DC53 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.41□□□□□ -1.38
Cpne8Q9DC53 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cpne8Q9DC53 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cpne8Q9DC53 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cpne8Q9DC53 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cpne8Q9DC53 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
Cpne8Q9DC53 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Cpne8Q9DC53 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Cpne8Q9DC53 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cpne8Q9DC53 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Cpne8Q9DC53 Gm11271-201ENSMUST00000116054 440 ntBASIC6.41□□□□□ -1.38
Cpne8Q9DC53 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.41□□□□□ -1.38
Cpne8Q9DC53 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.41□□□□□ -1.38
Cpne8Q9DC53 Gm14212-201ENSMUST00000122023 826 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms