Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Cdc40Q9DC48 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Mir680-1-201ENSMUST00000102257 109 ntBASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gm11799-201ENSMUST00000116110 460 ntBASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gm15765-201ENSMUST00000118407 910 ntBASIC5.92□□□□□ -1.46
Cdc40Q9DC48 M6pr-ps-201ENSMUST00000120481 830 ntBASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gm15300-201ENSMUST00000122324 279 ntBASIC5.92□□□□□ -1.46
Cdc40Q9DC48 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gm18447-201ENSMUST00000187501 307 ntBASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gm18799-201ENSMUST00000189104 913 ntBASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gm6074-201ENSMUST00000193340 451 ntBASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gm9517-201ENSMUST00000195021 874 ntBASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gm45196-201ENSMUST00000206751 825 ntBASIC5.92□□□□□ -1.46
Cdc40Q9DC48 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gm45514-201ENSMUST00000211531 689 ntBASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gm38574-201ENSMUST00000211855 640 ntBASIC5.92□□□□□ -1.46
Cdc40Q9DC48 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gm5436-201ENSMUST00000058103 643 ntBASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Gm43176-201ENSMUST00000199653 2989 ntBASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cdc40Q9DC48 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm42994-201ENSMUST00000195964 2549 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm13566-201ENSMUST00000117428 1142 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm14900-201ENSMUST00000120304 733 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm13642-201ENSMUST00000121697 381 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm12152-201ENSMUST00000122465 684 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm23071-201ENSMUST00000158242 115 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm25904-201ENSMUST00000158491 143 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm8895-201ENSMUST00000172300 1223 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm18006-201ENSMUST00000177411 662 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm9529-201ENSMUST00000177598 579 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm10410-201ENSMUST00000180138 384 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm26509-201ENSMUST00000180947 948 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm26898-201ENSMUST00000181678 384 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm28996-201ENSMUST00000190316 721 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm42613-201ENSMUST00000199975 1931 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm44039-201ENSMUST00000204192 2246 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm37183-201ENSMUST00000191712 3405 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cdc40Q9DC48 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Cdc40Q9DC48 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms