Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ddx56Q9D0R4 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ddx56Q9D0R4 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ddx56Q9D0R4 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ddx56Q9D0R4 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Ddx56Q9D0R4 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Ddx56Q9D0R4 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Ddx56Q9D0R4 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Ddx56Q9D0R4 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Ddx56Q9D0R4 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.04□□□□□ -1.28
Ddx56Q9D0R4 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC7.04□□□□□ -1.28
Ddx56Q9D0R4 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm42597-201ENSMUST00000196663 1544 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm44895-201ENSMUST00000206670 1538 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm37775-201ENSMUST00000194120 2313 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm25396-201ENSMUST00000103981 133 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm11970-201ENSMUST00000116105 320 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm14870-201ENSMUST00000118414 156 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm15311-201ENSMUST00000119682 282 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm15305-201ENSMUST00000120354 288 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm12001-201ENSMUST00000121727 913 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm25048-201ENSMUST00000158598 91 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm10074-201ENSMUST00000174543 249 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm20691-201ENSMUST00000176889 333 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm5345-201ENSMUST00000183076 1014 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm7867-201ENSMUST00000189856 546 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm3489-201ENSMUST00000190083 528 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm36997-201ENSMUST00000195090 707 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm38018-201ENSMUST00000195651 540 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm43546-201ENSMUST00000196721 943 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm20940-201ENSMUST00000197308 360 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm43243-201ENSMUST00000199964 278 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm42713-201ENSMUST00000202709 945 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm45136-201ENSMUST00000205793 943 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm8637-201ENSMUST00000212919 1085 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 CT030254.3-201ENSMUST00000225959 1231 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 AC140209.1-201ENSMUST00000227875 284 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm24621-201ENSMUST00000082679 140 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Mir138-2-201ENSMUST00000083578 71 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm24917-201ENSMUST00000083935 104 ntBASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ddx56Q9D0R4 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC7.02□□□□□ -1.28
Ddx56Q9D0R4 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.28
Ddx56Q9D0R4 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 AC153912.2-201ENSMUST00000215840 2015 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Mir674-201ENSMUST00000102421 100 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Snord88a-201ENSMUST00000116723 90 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm13732-201ENSMUST00000117753 535 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm12135-201ENSMUST00000119170 466 ntBASIC7.02□□□□□ -1.29
Ddx56Q9D0R4 Gm12174-201ENSMUST00000119853 813 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms