Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm25717-201ENSMUST00000158631 353 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm17217-201ENSMUST00000166613 469 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Mir6952-201ENSMUST00000185092 61 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm18700-201ENSMUST00000185791 553 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm7270-201ENSMUST00000195818 1128 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm43390-201ENSMUST00000196614 421 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm45070-201ENSMUST00000208100 246 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm44843-201ENSMUST00000208320 1396 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm45750-201ENSMUST00000211966 354 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm6056-201ENSMUST00000221253 488 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm2139-201ENSMUST00000222569 1075 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm9293-201ENSMUST00000223096 306 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm8256-203ENSMUST00000228692 591 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Skap2-205ENSMUST00000204778 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Scrt1Q99M85 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.61□□□□□ -1.51
Scrt1Q99M85 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm43029-201ENSMUST00000201829 1535 ntBASIC5.6□□□□□ -1.51
Scrt1Q99M85 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Reep3-202ENSMUST00000217841 2925 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm7961-201ENSMUST00000201338 1436 ntBASIC5.6□□□□□ -1.51
Scrt1Q99M85 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm18199-201ENSMUST00000173820 835 ntBASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm6061-201ENSMUST00000175860 492 ntBASIC5.6□□□□□ -1.51
Scrt1Q99M85 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm20691-201ENSMUST00000176889 333 ntBASIC5.6□□□□□ -1.51
Scrt1Q99M85 Mir6348-201ENSMUST00000183804 120 ntBASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm43354-201ENSMUST00000196862 346 ntBASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm44361-201ENSMUST00000197960 94 ntBASIC5.6□□□□□ -1.51
Scrt1Q99M85 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm42886-201ENSMUST00000199214 466 ntBASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm18839-201ENSMUST00000204292 670 ntBASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm46364-201ENSMUST00000218548 319 ntBASIC5.6□□□□□ -1.51
Scrt1Q99M85 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm9269-201ENSMUST00000221661 578 ntBASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm9315-201ENSMUST00000222696 908 ntBASIC5.6□□□□□ -1.51
Scrt1Q99M85 AC154431.2-201ENSMUST00000225215 1055 ntBASIC5.6□□□□□ -1.51
Scrt1Q99M85 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Scrt1Q99M85 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 AC122828.2-201ENSMUST00000222511 2880 ntBASIC5.6□□□□□ -1.51
Scrt1Q99M85 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scrt1Q99M85 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms