Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm23954-201ENSMUST00000157213 353 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm25675-201ENSMUST00000174979 118 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm25617-201ENSMUST00000179548 133 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm27853-201ENSMUST00000184176 250 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm27866-201ENSMUST00000184459 171 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm44361-201ENSMUST00000197960 94 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm25617-202ENSMUST00000198387 132 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 AC134333.1-201ENSMUST00000204536 944 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm44896-201ENSMUST00000206190 772 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm6070-201ENSMUST00000207275 419 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm24411-201ENSMUST00000083428 131 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm14367-201ENSMUST00000119214 1497 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.06□□□□□ -1.44
Lsm1Q8VC85 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Lsm1Q8VC85 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm15016-201ENSMUST00000117300 720 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm15901-201ENSMUST00000117663 941 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm14563-201ENSMUST00000120571 354 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm23884-201ENSMUST00000122687 294 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm22604-201ENSMUST00000157604 311 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Mir683-1-201ENSMUST00000179371 109 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm8609-201ENSMUST00000182967 998 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm29784-201ENSMUST00000196217 406 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm43243-201ENSMUST00000199964 278 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm6681-201ENSMUST00000205215 607 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm46364-201ENSMUST00000218548 319 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 AC155834.1-201ENSMUST00000220033 498 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 AC154283.1-201ENSMUST00000228417 389 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Gm43425-201ENSMUST00000201793 3291 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Robo2-210ENSMUST00000226478 8059 ntBASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.05□□□□□ -1.44
Lsm1Q8VC85 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Gm20789-201ENSMUST00000221002 4195 ntBASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm1Q8VC85 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms