Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm37369-201ENSMUST00000194179 615 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm42734-201ENSMUST00000201656 878 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm45198-201ENSMUST00000206796 591 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm7394-201ENSMUST00000209138 1032 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm7419-201ENSMUST00000209962 925 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 AC152940.1-201ENSMUST00000226504 139 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Cst11-201ENSMUST00000028934 615 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Gm22504-201ENSMUST00000082963 139 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 AC162467.3-201ENSMUST00000219716 2172 ntBASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Ccdc9Q8VC31 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Gm15778-201ENSMUST00000118469 608 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Gm12740-201ENSMUST00000118794 308 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Gm21999-201ENSMUST00000165985 387 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Gm7502-201ENSMUST00000169235 733 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Gm21430-201ENSMUST00000182998 998 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Gm27866-201ENSMUST00000184459 171 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Gm3121-201ENSMUST00000187086 406 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Gm37720-201ENSMUST00000195497 1241 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Gm3785-201ENSMUST00000221000 202 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 AC154747.4-201ENSMUST00000224802 903 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 AC122937.2-201ENSMUST00000228258 1051 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Gm37781-201ENSMUST00000194773 3218 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 AC131586.2-202ENSMUST00000227016 2705 ntBASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC7.56□□□□□ -1.2
Ccdc9Q8VC31 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Gm44144-201ENSMUST00000203683 1960 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Fam107b-209ENSMUST00000226435 3602 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Gm38124-201ENSMUST00000191710 2581 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Gm12641-201ENSMUST00000117874 985 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Gm14990-201ENSMUST00000122354 445 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Mir8114-201ENSMUST00000183582 111 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Gm37073-201ENSMUST00000192469 1222 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Ighv1-17-201ENSMUST00000194435 350 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Gm20690-202ENSMUST00000195126 355 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Gm38079-201ENSMUST00000195603 154 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Gm43037-201ENSMUST00000196808 250 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Gm45574-201ENSMUST00000210921 331 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Gm17997-201ENSMUST00000211801 840 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 AC133948.2-201ENSMUST00000217850 378 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC7.55□□□□□ -1.2
Ccdc9Q8VC31 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms