Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sf3a1Q8K4Z5 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Sf3a1Q8K4Z5 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sf3a1Q8K4Z5 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sf3a1Q8K4Z5 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Sf3a1Q8K4Z5 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
Sf3a1Q8K4Z5 Gm14245-201ENSMUST00000118939 1843 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm38368-201ENSMUST00000193181 1335 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm24989-201ENSMUST00000104461 88 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm12439-201ENSMUST00000117162 365 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm12653-201ENSMUST00000117778 561 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm7212-201ENSMUST00000120817 348 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm8722-201ENSMUST00000121466 769 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Sms-ps-201ENSMUST00000121773 1101 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm22764-201ENSMUST00000158370 92 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm18808-201ENSMUST00000173316 462 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm27158-201ENSMUST00000183813 238 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm29356-201ENSMUST00000186935 373 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm37103-201ENSMUST00000191830 115 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm7343-201ENSMUST00000194510 1061 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm19039-201ENSMUST00000204363 575 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 AC135353.1-201ENSMUST00000215330 630 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Gm9535-201ENSMUST00000218499 768 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC7.82□□□□□ -1.16
Sf3a1Q8K4Z5 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm29021-201ENSMUST00000185451 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28799-201ENSMUST00000186506 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28663-201ENSMUST00000186567 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28971-201ENSMUST00000187506 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28733-202ENSMUST00000187597 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28820-201ENSMUST00000188530 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm29606-202ENSMUST00000188564 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm29225-202ENSMUST00000188647 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28152-201ENSMUST00000188694 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28540-202ENSMUST00000189573 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm29122-203ENSMUST00000189609 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28613-201ENSMUST00000189627 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28816-202ENSMUST00000189686 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm29584-202ENSMUST00000190181 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28293-202ENSMUST00000190417 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28124-202ENSMUST00000191099 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm29217-202ENSMUST00000191270 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28332-203ENSMUST00000191389 1498 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm37346-201ENSMUST00000191665 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm38371-202ENSMUST00000193996 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm37434-203ENSMUST00000194239 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm37687-203ENSMUST00000195020 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gm37071-203ENSMUST00000195814 1498 ntTSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Sf3a1Q8K4Z5 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms