Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Gm20136-201ENSMUST00000207501 891 ntBASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Gm9535-201ENSMUST00000218499 768 ntBASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 AC154861.1-201ENSMUST00000223767 800 ntBASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 AC129537.1-201ENSMUST00000226596 1228 ntBASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc28aQ8CEI3 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm26146-201ENSMUST00000104478 185 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm14173-201ENSMUST00000117690 278 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm4789-201ENSMUST00000121708 1216 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm12929-201ENSMUST00000122406 370 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm23343-201ENSMUST00000158964 143 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm3242-201ENSMUST00000171273 485 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm22548-201ENSMUST00000174899 78 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm4845-201ENSMUST00000179202 562 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm17934-201ENSMUST00000192818 422 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm5318-201ENSMUST00000205249 406 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm39078-201ENSMUST00000207973 704 ntTSL 5 BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 CT009713.1-201ENSMUST00000224828 853 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm22300-201ENSMUST00000082661 126 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Ccdc28aQ8CEI3 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Ccdc28aQ8CEI3 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Ccdc28aQ8CEI3 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC6.46□□□□□ -1.37
Ccdc28aQ8CEI3 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.46□□□□□ -1.37
Ccdc28aQ8CEI3 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.46□□□□□ -1.37
Ccdc28aQ8CEI3 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Ccdc28aQ8CEI3 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Ccdc28aQ8CEI3 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm12565-201ENSMUST00000119004 649 ntBASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm13626-201ENSMUST00000119435 402 ntBASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm23674-201ENSMUST00000157473 131 ntBASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm23894-201ENSMUST00000158107 313 ntBASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm7418-201ENSMUST00000162120 801 ntBASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm7289-201ENSMUST00000168993 734 ntBASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm8609-201ENSMUST00000182967 998 ntBASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm29385-201ENSMUST00000186831 363 ntBASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.46□□□□□ -1.38
Ccdc28aQ8CEI3 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 121.2 ms