Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 CT025602.1-201ENSMUST00000227281 382 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Olfr1143-201ENSMUST00000090708 945 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Dglucy-208ENSMUST00000167322 2941 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm8995-202ENSMUST00000208417 3490 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 AC158605.4-201ENSMUST00000219013 3361 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 AC154482.1-201ENSMUST00000223248 2483 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Klf10-202ENSMUST00000226363 2917 ntBASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Trim47Q8C0E3 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Wnk1-218ENSMUST00000161512 1426 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Mir546-201ENSMUST00000102105 121 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm25546-201ENSMUST00000103977 132 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm25916-201ENSMUST00000104263 131 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm11371-201ENSMUST00000120294 385 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm5135-201ENSMUST00000121100 573 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm5578-201ENSMUST00000121490 1236 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm13282-201ENSMUST00000121577 545 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm11263-201ENSMUST00000121853 749 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm7973-201ENSMUST00000122107 488 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm22452-201ENSMUST00000122804 104 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm24422-201ENSMUST00000157800 119 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm25839-201ENSMUST00000158921 103 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm8305-201ENSMUST00000180022 1195 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm27218-201ENSMUST00000183745 392 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm27204-201ENSMUST00000184673 527 ntTSL 2 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm28983-201ENSMUST00000186685 614 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm28150-201ENSMUST00000187305 614 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm28377-201ENSMUST00000189695 720 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm29496-201ENSMUST00000189854 693 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm38149-201ENSMUST00000191943 339 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm37288-201ENSMUST00000193963 334 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm38079-201ENSMUST00000195603 154 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Ighv8-15-201ENSMUST00000197770 294 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm44192-201ENSMUST00000204195 556 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm19092-201ENSMUST00000209036 969 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 AC153975.1-201ENSMUST00000220087 926 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Gm2654-201ENSMUST00000221381 1592 ntBASIC8.22□□□□□ -1.09
Trim47Q8C0E3 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms