Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 AC154368.2-201ENSMUST00000222334 1724 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm24989-201ENSMUST00000104461 88 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm7146-201ENSMUST00000116079 739 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm13428-201ENSMUST00000117540 365 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm15078-201ENSMUST00000118371 782 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm18833-201ENSMUST00000173218 862 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm27219-201ENSMUST00000184633 742 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm5066-201ENSMUST00000188479 822 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm8869-201ENSMUST00000195222 947 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm7663-201ENSMUST00000201151 1240 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm44213-201ENSMUST00000204977 703 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm45026-201ENSMUST00000205292 833 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm9292-201ENSMUST00000222008 710 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 AC131743.3-201ENSMUST00000222099 662 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm37783-201ENSMUST00000192025 1856 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm5949-201ENSMUST00000213468 1421 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm18878-201ENSMUST00000223071 1443 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 AC151904.1-201ENSMUST00000219945 1498 ntBASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Ddx55Q6ZPL9 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Gm43557-201ENSMUST00000197100 2370 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 AC174797.5-201ENSMUST00000225055 1860 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Gm23995-201ENSMUST00000158060 129 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Gm26381-201ENSMUST00000174895 92 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Gm29201-201ENSMUST00000189120 431 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Gm18717-201ENSMUST00000192744 1241 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Gm43235-201ENSMUST00000200121 297 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Gm45696-201ENSMUST00000212088 985 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 AC147615.1-201ENSMUST00000218914 441 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 n-R5s56-201ENSMUST00000082521 105 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Nckap5-203ENSMUST00000094610 739 ntTSL 3 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Gm43769-201ENSMUST00000201871 4323 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Ddx55Q6ZPL9 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms