Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
Scaf4Q6PFF0 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
Scaf4Q6PFF0 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scaf4Q6PFF0 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scaf4Q6PFF0 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scaf4Q6PFF0 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Scaf4Q6PFF0 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Scaf4Q6PFF0 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Scaf4Q6PFF0 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.77□□□□□ -1.33
Scaf4Q6PFF0 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scaf4Q6PFF0 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Scaf4Q6PFF0 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Scaf4Q6PFF0 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Scaf4Q6PFF0 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
Scaf4Q6PFF0 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.77□□□□□ -1.33
Scaf4Q6PFF0 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.77□□□□□ -1.33
Scaf4Q6PFF0 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm25167-201ENSMUST00000104188 120 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm13195-201ENSMUST00000117229 261 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm14016-201ENSMUST00000119095 486 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm14898-201ENSMUST00000120202 645 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm16200-201ENSMUST00000120385 331 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Mup-ps22-201ENSMUST00000121611 243 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm22895-201ENSMUST00000157508 308 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm23587-201ENSMUST00000157658 84 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm24854-201ENSMUST00000158025 98 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm17038-201ENSMUST00000166586 494 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Samd15-201ENSMUST00000169669 1194 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm8893-201ENSMUST00000172146 1242 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Vis1-201ENSMUST00000183957 201 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm27373-201ENSMUST00000184017 184 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Mir6337-201ENSMUST00000184194 105 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm28594-201ENSMUST00000187022 661 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm29175-201ENSMUST00000189500 402 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm38164-201ENSMUST00000192810 330 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm36448-201ENSMUST00000199916 438 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm43659-201ENSMUST00000200894 628 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm21054-201ENSMUST00000203981 380 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm44705-201ENSMUST00000206719 339 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 CT009556.3-201ENSMUST00000226173 513 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 CT025630.2-201ENSMUST00000228293 487 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 AC158981.3-202ENSMUST00000228906 523 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm5815-201ENSMUST00000050706 1185 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm20900-201ENSMUST00000078729 472 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Scaf4Q6PFF0 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 376.7 ms