Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Gm9293-201ENSMUST00000223096 306 ntBASIC7.29□□□□□ -1.24
Nup98Q6PFD9 AC136376.1-201ENSMUST00000228496 950 ntBASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Gm45493-201ENSMUST00000209494 3948 ntBASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Gm37894-201ENSMUST00000195416 2599 ntBASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Gm26067-201ENSMUST00000103789 110 ntBASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Gm8323-201ENSMUST00000168436 1201 ntBASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Gm22690-201ENSMUST00000175054 110 ntBASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Gm2877-201ENSMUST00000178248 1204 ntBASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Gm8324-201ENSMUST00000178911 1204 ntBASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Gm2871-201ENSMUST00000179984 1204 ntBASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Gm44697-201ENSMUST00000207756 1679 ntBASIC7.29□□□□□ -1.24
Nup98Q6PFD9 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC7.28□□□□□ -1.24
Nup98Q6PFD9 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Gm42544-201ENSMUST00000197868 3242 ntBASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Gm25345-201ENSMUST00000104505 133 ntBASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Gm14115-201ENSMUST00000119242 482 ntBASIC7.28□□□□□ -1.24
Nup98Q6PFD9 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Gm23280-201ENSMUST00000157905 139 ntBASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Obox3-ps6-201ENSMUST00000176273 1005 ntBASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Gm21399-201ENSMUST00000180210 597 ntBASIC7.28□□□□□ -1.24
Nup98Q6PFD9 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Gm6068-201ENSMUST00000222270 387 ntBASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Gm24029-201ENSMUST00000083928 143 ntBASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC7.28□□□□□ -1.24
Nup98Q6PFD9 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.24
Nup98Q6PFD9 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.24
Nup98Q6PFD9 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Gm37364-201ENSMUST00000192533 3920 ntBASIC7.27□□□□□ -1.25
Nup98Q6PFD9 AC022682.2-202ENSMUST00000224394 3943 ntBASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Gm15040-201ENSMUST00000118561 1241 ntBASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Gm12768-201ENSMUST00000120055 759 ntBASIC7.27□□□□□ -1.25
Nup98Q6PFD9 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Gm27960-201ENSMUST00000183445 184 ntBASIC7.27□□□□□ -1.25
Nup98Q6PFD9 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC7.27□□□□□ -1.25
Nup98Q6PFD9 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Gm44795-201ENSMUST00000205496 319 ntBASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Gm45750-201ENSMUST00000211966 354 ntBASIC7.27□□□□□ -1.25
Nup98Q6PFD9 AC159208.1-201ENSMUST00000221403 649 ntBASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Nalcn-201ENSMUST00000000201 7122 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Nup98Q6PFD9 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Gm36981-201ENSMUST00000192340 4485 ntBASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Gm37951-201ENSMUST00000192963 3032 ntBASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Gm16270-201ENSMUST00000160327 3238 ntBASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Nup98Q6PFD9 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms