Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Upf3bQ3ULL6 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Upf3bQ3ULL6 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.72□□□□□ -1.33
Upf3bQ3ULL6 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Upf3bQ3ULL6 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Upf3bQ3ULL6 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Upf3bQ3ULL6 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC6.71□□□□□ -1.33
Upf3bQ3ULL6 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Upf3bQ3ULL6 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Upf3bQ3ULL6 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.71□□□□□ -1.33
Upf3bQ3ULL6 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Upf3bQ3ULL6 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Upf3bQ3ULL6 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Upf3bQ3ULL6 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
Upf3bQ3ULL6 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.71□□□□□ -1.33
Upf3bQ3ULL6 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm13346-201ENSMUST00000135767 3634 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm24069-201ENSMUST00000104512 127 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm14173-201ENSMUST00000117690 278 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm8692-201ENSMUST00000118102 438 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Mir1960-201ENSMUST00000157488 78 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm26486-201ENSMUST00000158021 110 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm24735-201ENSMUST00000158859 118 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm37135-201ENSMUST00000192652 534 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm38291-201ENSMUST00000193671 259 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm37477-201ENSMUST00000195215 884 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm7492-201ENSMUST00000201745 725 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Upf3bQ3ULL6 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Gm13183-201ENSMUST00000118615 789 ntBASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Gm45127-201ENSMUST00000205984 1015 ntBASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Gm45473-201ENSMUST00000211452 616 ntBASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Gm18618-201ENSMUST00000222211 473 ntBASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Upf3bQ3ULL6 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms