Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Gm45122-201ENSMUST00000206376 784 ntBASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Gm45379-201ENSMUST00000211772 549 ntBASIC6.45□□□□□ -1.38
Usp39Q3TIX9 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 AC154594.1-201ENSMUST00000225171 1273 ntBASIC6.45□□□□□ -1.38
Usp39Q3TIX9 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Gm24451-201ENSMUST00000083353 133 ntBASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Usp39Q3TIX9 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm24473-201ENSMUST00000104483 131 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm5601-201ENSMUST00000118909 972 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm11370-201ENSMUST00000120583 260 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm16298-201ENSMUST00000161107 420 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm17164-201ENSMUST00000169013 506 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Mir6337-201ENSMUST00000184194 105 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Mir6989-201ENSMUST00000184812 65 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm28917-201ENSMUST00000187294 237 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm37191-201ENSMUST00000193346 388 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm19185-201ENSMUST00000196365 643 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm43546-201ENSMUST00000196721 943 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm43044-201ENSMUST00000198091 379 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm42713-201ENSMUST00000202709 945 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm45136-201ENSMUST00000205793 943 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm7351-201ENSMUST00000210745 580 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gm19174-201ENSMUST00000216944 956 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 AC158536.1-201ENSMUST00000222510 256 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 AC139294.2-201ENSMUST00000227159 285 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 AC121542.1-201ENSMUST00000227245 721 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Usp39Q3TIX9 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 150.2 ms