Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC7.07□□□□□ -1.28
Sox9Q04887 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm10416-201ENSMUST00000197379 645 ntBASIC7.07□□□□□ -1.28
Sox9Q04887 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm43090-201ENSMUST00000202459 314 ntBASIC7.07□□□□□ -1.28
Sox9Q04887 Gm43992-201ENSMUST00000204358 197 ntBASIC7.07□□□□□ -1.28
Sox9Q04887 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC7.07□□□□□ -1.28
Sox9Q04887 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm46203-201ENSMUST00000218130 478 ntBASIC7.07□□□□□ -1.28
Sox9Q04887 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.07□□□□□ -1.28
Sox9Q04887 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC7.07□□□□□ -1.28
Sox9Q04887 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox9Q04887 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm15189-201ENSMUST00000121164 1966 ntBASIC7.07□□□□□ -1.28
Sox9Q04887 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox9Q04887 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
Sox9Q04887 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Sox9Q04887 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox9Q04887 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
Sox9Q04887 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC7.07□□□□□ -1.28
Sox9Q04887 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.06□□□□□ -1.28
Sox9Q04887 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Sox9Q04887 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Gm24340-201ENSMUST00000104208 97 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Gm12577-201ENSMUST00000119701 574 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Gm14614-201ENSMUST00000119873 384 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Sox9Q04887 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Gm12222-201ENSMUST00000121368 260 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Gm13462-201ENSMUST00000121472 961 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.06□□□□□ -1.28
Sox9Q04887 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC7.06□□□□□ -1.28
Sox9Q04887 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Gm26162-201ENSMUST00000157793 132 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Gm18700-201ENSMUST00000185791 553 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Gm21742-201ENSMUST00000189352 548 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Gm28620-201ENSMUST00000190463 439 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Gm37187-201ENSMUST00000193425 341 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC7.06□□□□□ -1.28
Sox9Q04887 Gm7463-201ENSMUST00000201541 547 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Mitf-208ENSMUST00000203938 1074 ntTSL 5 BASIC7.06□□□□□ -1.28
Sox9Q04887 Gm5154-201ENSMUST00000203971 399 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sox9Q04887 Gm4510-201ENSMUST00000218265 427 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Gm17849-201ENSMUST00000219788 853 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Gm4012-201ENSMUST00000221504 581 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Sox9Q04887 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Sox9Q04887 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Sox9Q04887 Gm5471-201ENSMUST00000072732 337 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Sox9Q04887 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Gm28112-201ENSMUST00000190898 1875 ntBASIC7.06□□□□□ -1.28
Sox9Q04887 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Sox9Q04887 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sox9Q04887 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.06□□□□□ -1.28
Sox9Q04887 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox9Q04887 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox9Q04887 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Sox9Q04887 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Sox9Q04887 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 AC158388.2-201ENSMUST00000223665 1314 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Sox9Q04887 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Gm42881-201ENSMUST00000198636 3344 ntBASIC7.05□□□□□ -1.28
Sox9Q04887 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Sox9Q04887 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Sox9Q04887 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms