Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm24754-201ENSMUST00000177997 107 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm27163-201ENSMUST00000184767 409 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm29073-201ENSMUST00000185563 664 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm29165-201ENSMUST00000190655 664 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm29211-201ENSMUST00000191470 664 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Trav15d-3-201ENSMUST00000198604 167 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm45279-201ENSMUST00000210315 391 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm33178-201ENSMUST00000212090 257 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.08□□□□□ -1.44
Col8a1Q00780 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC6.08□□□□□ -1.44
Col8a1Q00780 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 AC117797.2-201ENSMUST00000224419 531 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 AC124729.1-202ENSMUST00000225587 938 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm9788-201ENSMUST00000057038 906 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm22977-201ENSMUST00000082615 107 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm24451-201ENSMUST00000083353 133 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC6.08□□□□□ -1.44
Col8a1Q00780 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 CT009711.1-201ENSMUST00000223992 3040 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Gm38331-201ENSMUST00000195719 2671 ntBASIC6.08□□□□□ -1.44
Col8a1Q00780 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col8a1Q00780 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm43181-201ENSMUST00000197001 2072 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Fshr-201ENSMUST00000035701 2079 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm22927-201ENSMUST00000104268 131 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm25498-201ENSMUST00000104424 129 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm24069-201ENSMUST00000104512 127 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm13607-201ENSMUST00000117875 539 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm16200-201ENSMUST00000120385 331 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm15192-201ENSMUST00000121005 293 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm14787-201ENSMUST00000121236 388 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm25505-201ENSMUST00000157220 246 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm3102-201ENSMUST00000164236 489 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm9672-201ENSMUST00000166437 425 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm17064-201ENSMUST00000167690 452 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Rps12l1-201ENSMUST00000183090 399 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm27998-201ENSMUST00000184902 361 ntBASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC6.07□□□□□ -1.44
Col8a1Q00780 Gm37463-201ENSMUST00000193819 796 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms