Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 D7Ertd443e-201ENSMUST00000094002 2908 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Gm44763-201ENSMUST00000208287 2019 ntBASIC7.36□□□□□ -1.23
Sox1P53783 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Sox1P53783 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Gm14358-201ENSMUST00000118458 403 ntBASIC7.36□□□□□ -1.23
Sox1P53783 Gm12565-201ENSMUST00000119004 649 ntBASIC7.36□□□□□ -1.23
Sox1P53783 Gm12317-201ENSMUST00000122307 319 ntBASIC7.36□□□□□ -1.23
Sox1P53783 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Scarna6-201ENSMUST00000158656 265 ntBASIC7.36□□□□□ -1.23
Sox1P53783 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC7.36□□□□□ -1.23
Sox1P53783 Gm20397-201ENSMUST00000174520 362 ntBASIC7.36□□□□□ -1.23
Sox1P53783 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC7.36□□□□□ -1.23
Sox1P53783 Gm6261-201ENSMUST00000204707 760 ntBASIC7.36□□□□□ -1.23
Sox1P53783 Gm6230-201ENSMUST00000208077 780 ntBASIC7.36□□□□□ -1.23
Sox1P53783 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Gm18562-201ENSMUST00000209949 915 ntBASIC7.36□□□□□ -1.23
Sox1P53783 AC112274.2-201ENSMUST00000218436 170 ntBASIC7.36□□□□□ -1.23
Sox1P53783 Gm35619-201ENSMUST00000222548 600 ntBASIC7.36□□□□□ -1.23
Sox1P53783 AC167669.3-201ENSMUST00000224720 393 ntBASIC7.36□□□□□ -1.23
Sox1P53783 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Sox1P53783 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Catsperg1-202ENSMUST00000069861 2251 ntTSL 2 BASIC7.36□□□□□ -1.23
Sox1P53783 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Sox1P53783 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.36□□□□□ -1.23
Sox1P53783 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC7.36□□□□□ -1.23
Sox1P53783 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Sox1P53783 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Sox1P53783 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Gm15789-201ENSMUST00000118992 1359 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Sox1P53783 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Sox1P53783 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Sox1P53783 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
Sox1P53783 Gm15765-201ENSMUST00000118407 910 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Gm6446-201ENSMUST00000120604 818 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Gm15750-201ENSMUST00000120970 616 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Gm11257-201ENSMUST00000121313 315 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Gm11575-201ENSMUST00000122243 228 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Gm13194-201ENSMUST00000142299 311 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Gm24719-201ENSMUST00000157520 110 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Gm27512-201ENSMUST00000175328 126 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Gm7952-201ENSMUST00000180540 984 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Gm18797-201ENSMUST00000190809 1174 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Gm7946-201ENSMUST00000203326 958 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Gm44911-201ENSMUST00000208436 1062 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Gm45658-201ENSMUST00000209197 580 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC7.35□□□□□ -1.23
Sox1P53783 Gm5055-201ENSMUST00000215697 581 ntBASIC7.35□□□□□ -1.23
Sox1P53783 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC7.35□□□□□ -1.23
Sox1P53783 AC121844.1-201ENSMUST00000218706 137 ntBASIC7.35□□□□□ -1.23
Sox1P53783 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC7.35□□□□□ -1.23
Sox1P53783 Gm18338-201ENSMUST00000222381 560 ntBASIC7.35□□□□□ -1.23
Sox1P53783 AC130823.2-201ENSMUST00000226169 290 ntBASIC7.35□□□□□ -1.23
Sox1P53783 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC7.35□□□□□ -1.23
Sox1P53783 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Sox1P53783 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC7.35□□□□□ -1.23
Sox1P53783 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Sox1P53783 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC7.35□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms