Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm43425-201ENSMUST00000201793 3291 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Cux1P53564 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC9.56□□□□□ -0.88
Cux1P53564 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cux1P53564 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Cux1P53564 Gm43707-201ENSMUST00000196451 3187 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Cux1P53564 Gm24886-201ENSMUST00000104384 123 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cux1P53564 Gm22194-201ENSMUST00000116869 95 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Gm14220-201ENSMUST00000118114 449 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Gm11972-201ENSMUST00000118514 389 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Gm14970-201ENSMUST00000122289 355 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cux1P53564 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC9.56□□□□□ -0.88
Cux1P53564 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC9.56□□□□□ -0.88
Cux1P53564 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cux1P53564 AC166358.3-201ENSMUST00000221456 181 ntBASIC9.56□□□□□ -0.88
Cux1P53564 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC9.56□□□□□ -0.88
Cux1P53564 AC125543.4-201ENSMUST00000223385 117 ntBASIC9.56□□□□□ -0.88
Cux1P53564 AC154767.2-201ENSMUST00000224584 414 ntBASIC9.56□□□□□ -0.88
Cux1P53564 AC129537.1-201ENSMUST00000226596 1228 ntBASIC9.56□□□□□ -0.88
Cux1P53564 AC164302.1-201ENSMUST00000227036 433 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Gm2531-201ENSMUST00000075609 512 ntBASIC9.56□□□□□ -0.88
Cux1P53564 n-R5s69-201ENSMUST00000083872 119 ntBASIC9.56□□□□□ -0.88
Cux1P53564 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC9.55□□□□□ -0.88
Cux1P53564 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC9.55□□□□□ -0.88
Cux1P53564 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC9.55□□□□□ -0.88
Cux1P53564 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC9.55□□□□□ -0.88
Cux1P53564 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC9.55□□□□□ -0.88
Cux1P53564 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC9.55□□□□□ -0.88
Cux1P53564 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC9.55□□□□□ -0.88
Cux1P53564 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC9.55□□□□□ -0.88
Cux1P53564 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC9.55□□□□□ -0.88
Cux1P53564 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC9.55□□□□□ -0.88
Cux1P53564 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC9.55□□□□□ -0.88
Cux1P53564 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC9.55□□□□□ -0.88
Cux1P53564 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Gm29438-201ENSMUST00000191298 2613 ntBASIC9.55□□□□□ -0.88
Cux1P53564 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC9.55□□□□□ -0.88
Cux1P53564 Gm37221-201ENSMUST00000194472 3007 ntBASIC9.55□□□□□ -0.88
Cux1P53564 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Gm13866-201ENSMUST00000118901 968 ntBASIC9.55□□□□□ -0.88
Cux1P53564 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC9.55□□□□□ -0.88
Cux1P53564 Klra13-ps-201ENSMUST00000125813 802 ntBASIC9.55□□□□□ -0.88
Cux1P53564 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Cux1P53564 Gm2959-201ENSMUST00000169844 621 ntBASIC9.55□□□□□ -0.88
Cux1P53564 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Cux1P53564 Gm1972-201ENSMUST00000181606 964 ntBASIC9.55□□□□□ -0.88
Cux1P53564 Gm27355-201ENSMUST00000185045 128 ntBASIC9.55□□□□□ -0.88
Cux1P53564 Igkv3-8-201ENSMUST00000197635 339 ntBASIC9.55□□□□□ -0.88
Cux1P53564 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC9.55□□□□□ -0.88
Cux1P53564 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Cux1P53564 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cux1P53564 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC9.54□□□□□ -0.88
Cux1P53564 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cux1P53564 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cux1P53564 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC9.54□□□□□ -0.88
Cux1P53564 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cux1P53564 Ikbkg-207ENSMUST00000114133 6994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cux1P53564 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC9.54□□□□□ -0.88
Cux1P53564 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC9.54□□□□□ -0.88
Cux1P53564 Gm18880-201ENSMUST00000223333 1541 ntBASIC9.54□□□□□ -0.88
Cux1P53564 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Cux1P53564 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC9.54□□□□□ -0.88
Cux1P53564 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cux1P53564 Gm38029-201ENSMUST00000192669 2090 ntBASIC9.54□□□□□ -0.88
Cux1P53564 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cux1P53564 Gm12077-201ENSMUST00000117049 364 ntBASIC9.54□□□□□ -0.88
Cux1P53564 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC9.54□□□□□ -0.88
Cux1P53564 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC9.54□□□□□ -0.88
Cux1P53564 Gm22636-201ENSMUST00000158142 275 ntBASIC9.54□□□□□ -0.88
Cux1P53564 Gm27225-201ENSMUST00000183833 557 ntBASIC9.54□□□□□ -0.88
Cux1P53564 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC9.54□□□□□ -0.88
Cux1P53564 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC9.54□□□□□ -0.88
Cux1P53564 Gm2287-202ENSMUST00000199619 1000 ntBASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 140.3 ms