Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Rfx3P48381 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfx3P48381 Gm9788-201ENSMUST00000057038 906 ntBASIC5.69□□□□□ -1.5
Rfx3P48381 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Rfx3P48381 Gm10540-201ENSMUST00000097581 276 ntBASIC5.69□□□□□ -1.5
Rfx3P48381 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfx3P48381 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Rfx3P48381 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Rfx3P48381 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfx3P48381 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Rfx3P48381 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Rfx3P48381 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfx3P48381 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfx3P48381 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Rfx3P48381 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Rfx3P48381 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.69□□□□□ -1.5
Rfx3P48381 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Rfx3P48381 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC5.68□□□□□ -1.5
Rfx3P48381 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Rfx3P48381 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Rfx3P48381 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Rfx3P48381 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.68□□□□□ -1.5
Rfx3P48381 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.68□□□□□ -1.5
Rfx3P48381 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Rfx3P48381 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Rfx3P48381 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Rfx3P48381 Gm25093-201ENSMUST00000103993 132 ntBASIC5.68□□□□□ -1.5
Rfx3P48381 Gm26422-201ENSMUST00000104276 132 ntBASIC5.68□□□□□ -1.5
Rfx3P48381 Gm16073-201ENSMUST00000116032 517 ntBASIC5.68□□□□□ -1.5
Rfx3P48381 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 Gm14733-201ENSMUST00000117680 133 ntBASIC5.68□□□□□ -1.5
Rfx3P48381 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.68□□□□□ -1.5
Rfx3P48381 Gm14863-201ENSMUST00000119648 307 ntBASIC5.68□□□□□ -1.5
Rfx3P48381 Gm11434-201ENSMUST00000122379 629 ntBASIC5.68□□□□□ -1.5
Rfx3P48381 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.68□□□□□ -1.5
Rfx3P48381 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.68□□□□□ -1.5
Rfx3P48381 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC5.68□□□□□ -1.5
Rfx3P48381 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.68□□□□□ -1.5
Rfx3P48381 Gm9504-201ENSMUST00000196322 468 ntBASIC5.68□□□□□ -1.5
Rfx3P48381 Gm1969-201ENSMUST00000198125 1220 ntBASIC5.68□□□□□ -1.5
Rfx3P48381 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.68□□□□□ -1.5
Rfx3P48381 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC5.68□□□□□ -1.5
Rfx3P48381 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Rfx3P48381 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC5.68□□□□□ -1.5
Rfx3P48381 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Rfx3P48381 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC5.68□□□□□ -1.5
Rfx3P48381 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Rfx3P48381 Gm37255-201ENSMUST00000193302 3060 ntBASIC5.68□□□□□ -1.5
Rfx3P48381 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Rfx3P48381 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Rfx3P48381 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rfx3P48381 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rfx3P48381 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.67□□□□□ -1.5
Rfx3P48381 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.67□□□□□ -1.5
Rfx3P48381 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.67□□□□□ -1.5
Rfx3P48381 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rfx3P48381 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Rfx3P48381 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Rfx3P48381 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.67□□□□□ -1.5
Rfx3P48381 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rfx3P48381 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rfx3P48381 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Rfx3P48381 Rnu11-201ENSMUST00000104135 134 ntBASIC5.67□□□□□ -1.5
Rfx3P48381 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rfx3P48381 Apc-ps1-201ENSMUST00000119356 470 ntBASIC5.67□□□□□ -1.5
Rfx3P48381 Gm16511-201ENSMUST00000120019 564 ntBASIC5.67□□□□□ -1.5
Rfx3P48381 Gm12175-201ENSMUST00000122081 345 ntBASIC5.67□□□□□ -1.5
Rfx3P48381 Gm14353-201ENSMUST00000122200 869 ntBASIC5.67□□□□□ -1.5
Rfx3P48381 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Rfx3P48381 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rfx3P48381 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rfx3P48381 Gm10364-202ENSMUST00000153034 1001 ntBASIC5.67□□□□□ -1.5
Rfx3P48381 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Rfx3P48381 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Rfx3P48381 Gm25675-201ENSMUST00000174979 118 ntBASIC5.67□□□□□ -1.5
Rfx3P48381 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.67□□□□□ -1.5
Rfx3P48381 Gm9127-201ENSMUST00000188041 985 ntBASIC5.67□□□□□ -1.5
Rfx3P48381 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Rfx3P48381 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC5.67□□□□□ -1.5
Rfx3P48381 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC5.67□□□□□ -1.5
Rfx3P48381 Gm2229-201ENSMUST00000193328 710 ntBASIC5.67□□□□□ -1.5
Rfx3P48381 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC5.67□□□□□ -1.5
Rfx3P48381 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC5.67□□□□□ -1.5
Rfx3P48381 Gm5853-201ENSMUST00000197183 632 ntBASIC5.67□□□□□ -1.5
Rfx3P48381 Gm43576-201ENSMUST00000197937 871 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms