Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.41□□□□□ -1.38
HttP42859 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HttP42859 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HttP42859 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.41□□□□□ -1.38
HttP42859 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 Gm12190-201ENSMUST00000120001 187 ntBASIC6.41□□□□□ -1.38
HttP42859 Gm15044-201ENSMUST00000120703 598 ntBASIC6.41□□□□□ -1.38
HttP42859 Gm15006-201ENSMUST00000121419 1122 ntBASIC6.41□□□□□ -1.38
HttP42859 Gm23537-201ENSMUST00000157536 330 ntBASIC6.41□□□□□ -1.38
HttP42859 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC6.41□□□□□ -1.38
HttP42859 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.41□□□□□ -1.38
HttP42859 Gm44539-201ENSMUST00000206010 238 ntBASIC6.41□□□□□ -1.38
HttP42859 AC134334.2-201ENSMUST00000214628 681 ntTSL 5 BASIC6.41□□□□□ -1.38
HttP42859 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HttP42859 Olfr1246-202ENSMUST00000213221 5338 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HttP42859 Olfr1246-203ENSMUST00000217192 5301 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HttP42859 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HttP42859 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC6.41□□□□□ -1.38
HttP42859 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HttP42859 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HttP42859 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HttP42859 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HttP42859 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HttP42859 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HttP42859 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
HttP42859 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HttP42859 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HttP42859 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
HttP42859 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HttP42859 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.4□□□□□ -1.38
HttP42859 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HttP42859 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
HttP42859 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
HttP42859 n-R5s82-201ENSMUST00000104213 109 ntBASIC6.4□□□□□ -1.38
HttP42859 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.4□□□□□ -1.38
HttP42859 Gm13681-201ENSMUST00000117925 210 ntBASIC6.4□□□□□ -1.38
HttP42859 Gm15186-201ENSMUST00000119345 563 ntBASIC6.4□□□□□ -1.38
HttP42859 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC6.4□□□□□ -1.38
HttP42859 Gm15428-201ENSMUST00000121352 333 ntBASIC6.4□□□□□ -1.38
HttP42859 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC6.4□□□□□ -1.38
HttP42859 Gm7557-201ENSMUST00000221935 865 ntBASIC6.4□□□□□ -1.38
HttP42859 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HttP42859 AC166574.1-201ENSMUST00000226916 1309 ntBASIC6.4□□□□□ -1.38
HttP42859 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HttP42859 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.39
HttP42859 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
HttP42859 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.4□□□□□ -1.39
HttP42859 Gm12641-201ENSMUST00000117874 985 ntBASIC6.4□□□□□ -1.39
HttP42859 Gm12040-201ENSMUST00000118357 537 ntBASIC6.4□□□□□ -1.39
HttP42859 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HttP42859 Gm26318-201ENSMUST00000176507 96 ntBASIC6.4□□□□□ -1.39
HttP42859 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
HttP42859 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
HttP42859 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HttP42859 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.4□□□□□ -1.39
HttP42859 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.4□□□□□ -1.39
HttP42859 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HttP42859 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HttP42859 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HttP42859 Gm24469-201ENSMUST00000104487 131 ntBASIC6.39□□□□□ -1.39
HttP42859 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HttP42859 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
HttP42859 Mir1946b-201ENSMUST00000157853 133 ntBASIC6.39□□□□□ -1.39
HttP42859 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.39□□□□□ -1.39
HttP42859 Gm4831-201ENSMUST00000174626 594 ntBASIC6.39□□□□□ -1.39
HttP42859 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.39□□□□□ -1.39
HttP42859 Gm18127-201ENSMUST00000208479 725 ntBASIC6.39□□□□□ -1.39
HttP42859 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HttP42859 AW146154-201ENSMUST00000098509 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HttP42859 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.39□□□□□ -1.39
HttP42859 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.39□□□□□ -1.39
HttP42859 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HttP42859 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
HttP42859 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HttP42859 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
HttP42859 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.39□□□□□ -1.39
HttP42859 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC6.39□□□□□ -1.39
HttP42859 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HttP42859 Gm5386-201ENSMUST00000121749 2450 ntBASIC6.39□□□□□ -1.39
HttP42859 Gm14842-201ENSMUST00000119577 269 ntBASIC6.39□□□□□ -1.39
HttP42859 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.39□□□□□ -1.39
HttP42859 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HttP42859 Gm45731-201ENSMUST00000211988 1203 ntBASIC6.39□□□□□ -1.39
HttP42859 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.39□□□□□ -1.39
HttP42859 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HttP42859 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.39□□□□□ -1.39
HttP42859 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HttP42859 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HttP42859 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms