Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.14□□□□□ -1.59
VhlP40338 Gm37234-201ENSMUST00000193259 1441 ntBASIC5.14□□□□□ -1.59
VhlP40338 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
VhlP40338 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
VhlP40338 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VhlP40338 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
VhlP40338 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC5.13□□□□□ -1.59
VhlP40338 Gm38062-201ENSMUST00000192541 1856 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.13□□□□□ -1.59
VhlP40338 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.13□□□□□ -1.59
VhlP40338 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC5.13□□□□□ -1.59
VhlP40338 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VhlP40338 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.13□□□□□ -1.59
VhlP40338 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
VhlP40338 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.13□□□□□ -1.59
VhlP40338 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VhlP40338 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VhlP40338 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VhlP40338 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Gm13768-201ENSMUST00000116469 929 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm22103-201ENSMUST00000116733 121 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm26475-201ENSMUST00000116769 121 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm23620-201ENSMUST00000116812 121 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm25042-201ENSMUST00000116856 121 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm25540-201ENSMUST00000116880 121 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm11501-201ENSMUST00000118039 581 ntBASIC5.13□□□□□ -1.59
VhlP40338 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm5578-201ENSMUST00000121490 1236 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC5.13□□□□□ -1.59
VhlP40338 Gm22311-201ENSMUST00000158006 110 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Gm23550-201ENSMUST00000179003 121 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm25123-201ENSMUST00000179154 121 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm25353-201ENSMUST00000179366 121 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm22992-201ENSMUST00000179496 121 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm25892-201ENSMUST00000179867 121 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm24092-201ENSMUST00000180257 121 ntBASIC5.13□□□□□ -1.59
VhlP40338 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.13□□□□□ -1.59
VhlP40338 Gm27295-201ENSMUST00000184264 153 ntBASIC5.13□□□□□ -1.59
VhlP40338 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC5.13□□□□□ -1.59
VhlP40338 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.13□□□□□ -1.59
VhlP40338 Gm37285-201ENSMUST00000194465 1139 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm43048-201ENSMUST00000196101 388 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm5853-201ENSMUST00000197183 632 ntBASIC5.13□□□□□ -1.59
VhlP40338 Igkv4-77-201ENSMUST00000199410 352 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm43561-201ENSMUST00000199866 448 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm44837-201ENSMUST00000206863 717 ntBASIC5.13□□□□□ -1.59
VhlP40338 Gm5324-201ENSMUST00000208115 476 ntBASIC5.13□□□□□ -1.59
VhlP40338 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Gm6009-201ENSMUST00000210848 280 ntBASIC5.13□□□□□ -1.59
VhlP40338 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.13□□□□□ -1.59
VhlP40338 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC5.13□□□□□ -1.59
VhlP40338 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC5.13□□□□□ -1.59
VhlP40338 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC5.13□□□□□ -1.59
VhlP40338 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC5.13□□□□□ -1.59
VhlP40338 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC5.13□□□□□ -1.59
VhlP40338 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC5.13□□□□□ -1.59
VhlP40338 Gm18940-201ENSMUST00000222518 871 ntBASIC5.13□□□□□ -1.59
VhlP40338 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC5.13□□□□□ -1.59
VhlP40338 CT030184.2-201ENSMUST00000223064 263 ntBASIC5.13□□□□□ -1.59
VhlP40338 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
VhlP40338 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Gm6327-201ENSMUST00000171185 1335 ntBASIC5.13□□□□□ -1.59
VhlP40338 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Gm8177-201ENSMUST00000181591 1336 ntBASIC5.13□□□□□ -1.59
VhlP40338 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
VhlP40338 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC5.13□□□□□ -1.59
VhlP40338 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
VhlP40338 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC5.13□□□□□ -1.59
VhlP40338 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VhlP40338 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VhlP40338 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
VhlP40338 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.12□□□□□ -1.59
VhlP40338 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC5.12□□□□□ -1.59
VhlP40338 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VhlP40338 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms