Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC8.42□□□□□ -1.06
Col18a1P39061 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.42□□□□□ -1.06
Col18a1P39061 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC8.42□□□□□ -1.06
Col18a1P39061 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col18a1P39061 Klhl32-203ENSMUST00000108214 5970 ntTSL 5 BASIC8.42□□□□□ -1.06
Col18a1P39061 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col18a1P39061 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col18a1P39061 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col18a1P39061 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Col18a1P39061 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Col18a1P39061 Gm14098-201ENSMUST00000119295 623 ntBASIC8.42□□□□□ -1.06
Col18a1P39061 Gm12494-201ENSMUST00000121684 521 ntBASIC8.42□□□□□ -1.06
Col18a1P39061 Gm22867-201ENSMUST00000157499 109 ntBASIC8.42□□□□□ -1.06
Col18a1P39061 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Col18a1P39061 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Col18a1P39061 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC8.42□□□□□ -1.06
Col18a1P39061 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col18a1P39061 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC8.42□□□□□ -1.06
Col18a1P39061 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Col18a1P39061 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col18a1P39061 Gm43491-201ENSMUST00000197133 784 ntBASIC8.42□□□□□ -1.06
Col18a1P39061 Gm2287-202ENSMUST00000199619 1000 ntBASIC8.42□□□□□ -1.06
Col18a1P39061 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC8.42□□□□□ -1.06
Col18a1P39061 Gm19269-201ENSMUST00000211401 804 ntBASIC8.42□□□□□ -1.06
Col18a1P39061 AC154838.2-201ENSMUST00000226602 747 ntBASIC8.42□□□□□ -1.06
Col18a1P39061 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col18a1P39061 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
Col18a1P39061 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Col18a1P39061 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Col18a1P39061 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Col18a1P39061 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Col18a1P39061 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col18a1P39061 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Col18a1P39061 Gm43181-201ENSMUST00000197001 2072 ntBASIC8.42□□□□□ -1.06
Col18a1P39061 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC8.42□□□□□ -1.06
Col18a1P39061 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Col18a1P39061 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col18a1P39061 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Col18a1P39061 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col18a1P39061 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col18a1P39061 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col18a1P39061 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col18a1P39061 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col18a1P39061 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col18a1P39061 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Col18a1P39061 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col18a1P39061 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col18a1P39061 Mir449c-201ENSMUST00000102192 109 ntBASIC8.41□□□□□ -1.06
Col18a1P39061 Mup-ps19-201ENSMUST00000120390 519 ntBASIC8.41□□□□□ -1.06
Col18a1P39061 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col18a1P39061 Gm23673-201ENSMUST00000157474 298 ntBASIC8.41□□□□□ -1.06
Col18a1P39061 Gm23224-201ENSMUST00000158122 271 ntBASIC8.41□□□□□ -1.06
Col18a1P39061 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Col18a1P39061 Gm17063-201ENSMUST00000168135 456 ntBASIC8.41□□□□□ -1.06
Col18a1P39061 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC8.41□□□□□ -1.06
Col18a1P39061 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC8.41□□□□□ -1.06
Col18a1P39061 Ighv5-21-201ENSMUST00000191935 295 ntBASIC8.41□□□□□ -1.06
Col18a1P39061 Gm17934-201ENSMUST00000192818 422 ntBASIC8.41□□□□□ -1.06
Col18a1P39061 Gm17992-201ENSMUST00000207346 1072 ntBASIC8.41□□□□□ -1.06
Col18a1P39061 Gm7780-201ENSMUST00000214787 406 ntBASIC8.41□□□□□ -1.06
Col18a1P39061 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC8.41□□□□□ -1.06
Col18a1P39061 AC124549.1-201ENSMUST00000225912 333 ntBASIC8.41□□□□□ -1.06
Col18a1P39061 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC8.41□□□□□ -1.06
Col18a1P39061 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Col18a1P39061 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Col18a1P39061 Gm18853-201ENSMUST00000183629 3596 ntBASIC8.41□□□□□ -1.06
Col18a1P39061 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.41□□□□□ -1.06
Col18a1P39061 Gm42653-201ENSMUST00000200644 2839 ntBASIC8.41□□□□□ -1.06
Col18a1P39061 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col18a1P39061 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Col18a1P39061 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col18a1P39061 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Col18a1P39061 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Col18a1P39061 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col18a1P39061 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Col18a1P39061 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col18a1P39061 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col18a1P39061 Dcn-202ENSMUST00000163448 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Col18a1P39061 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col18a1P39061 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Col18a1P39061 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC8.4□□□□□ -1.06
Col18a1P39061 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col18a1P39061 Gm23233-201ENSMUST00000157301 137 ntBASIC8.4□□□□□ -1.06
Col18a1P39061 Gm25057-201ENSMUST00000157366 88 ntBASIC8.4□□□□□ -1.06
Col18a1P39061 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Col18a1P39061 Gm28640-201ENSMUST00000190918 550 ntBASIC8.4□□□□□ -1.06
Col18a1P39061 Gm19214-201ENSMUST00000191956 1083 ntBASIC8.4□□□□□ -1.06
Col18a1P39061 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC8.4□□□□□ -1.06
Col18a1P39061 Gm18036-201ENSMUST00000195256 272 ntBASIC8.4□□□□□ -1.06
Col18a1P39061 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col18a1P39061 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Col18a1P39061 Gm42502-201ENSMUST00000198550 1089 ntBASIC8.4□□□□□ -1.06
Col18a1P39061 Gm29778-201ENSMUST00000201667 466 ntBASIC8.4□□□□□ -1.06
Col18a1P39061 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC8.4□□□□□ -1.06
Col18a1P39061 Gm45777-201ENSMUST00000213009 301 ntBASIC8.4□□□□□ -1.06
Col18a1P39061 Gm6068-201ENSMUST00000222270 387 ntBASIC8.4□□□□□ -1.06
Col18a1P39061 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC8.4□□□□□ -1.06
Col18a1P39061 CT030645.3-201ENSMUST00000225483 1022 ntBASIC8.4□□□□□ -1.06
Col18a1P39061 AC140288.1-201ENSMUST00000226329 503 ntBASIC8.4□□□□□ -1.06
Col18a1P39061 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms